RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ZNF134P52741 427 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 TLE1Q04724 770 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 SWI5Q1ZZU3 235 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 BTNL8Q6UX41 500 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 FAM216BQ8N7L0 139 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 FAM234AQ9H0X4 552 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 PARP11Q9NR21 331 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 WSB1Q9Y6I7 421 aa15.32■□□□□ 0.04
HOXC11-201ENST00000243082 SPTA1P02549 2419 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 RAI1Q7Z5J4 1906 aaPredicted RBP15.31■□□□□ 0.04
HOXC11-201ENST00000243082 B8ZZF3 427 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 KRASP01116 189 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 DANCRP0C864 163 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 G6PCP35575 357 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 RPL23AP62750 156 aaKnown RBP15.31■□□□□ 0.04
HOXC11-201ENST00000243082 SRSF3P84103 164 aaKnown RBP15.31■□□□□ 0.04
HOXC11-201ENST00000243082 PJVKQ0ZLH3 352 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 ZNF266Q14584 549 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 UTF1Q5T230 341 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 IL34Q6ZMJ4 242 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 TCF23Q7RTU1 214 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 FAM216AQ8WUB2 273 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 NEUROG1Q92886 237 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 VSTM5A8MXK1 200 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 SIGLEC5O15389 551 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 GPR12P47775 334 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 FAM209AQ5JX71 171 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 Q6ZRG5 221 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 TMEM217Q8N7C4 229 aa15.31■□□□□ 0.04
HOXC11-201ENST00000243082 KBTBD11-OT1A0A1B0GTJ5 212 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 H3BP45 60 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 CCL21O00585 134 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 TOR1AO14656 332 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 IGHV3-7P01780 117 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 DUTP33316 252 aaKnown RBP15.3■□□□□ 0.04
HOXC11-201ENST00000243082 ID4P47928 161 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 AKR1C1Q04828 323 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 LYPD6BQ8NI32 183 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 SAP30LQ9HAJ7 183 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 KCNJ16Q9NPI9 418 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 CLN8Q9UBY8 286 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 DSCAML1Q8TD84 2053 aa15.3■□□□□ 0.04
HOXC11-201ENST00000243082 LRRC30A6NM36 301 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 CLDN14O95500 239 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 C1QTNF9P0C862 333 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 IAPPP10997 89 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 FBXL19-AS1Q494R0 122 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 MIDNQ504T8 468 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 NCR3LG1Q68D85 454 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 RNASE6Q93091 150 aaKnown RBP15.29■□□□□ 0.04
HOXC11-201ENST00000243082 IFI27L2Q9H2X8 130 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 DIDO1Q9BTC0 2240 aaKnown RBP15.29■□□□□ 0.04
HOXC11-201ENST00000243082 TRGV10A0A0A0MS01 117 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 FAM90A26D6RGX4 464 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 CHRNB4P30926 498 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 SULT1A1P50225 295 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 NARS2Q96I59 477 aaKnown RBP15.29■□□□□ 0.04
HOXC11-201ENST00000243082 EGLN1Q9GZT9 426 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 MS4A7Q9GZW8 240 aaPredicted RBP15.29■□□□□ 0.04
HOXC11-201ENST00000243082 GFOD1Q9NXC2 390 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 CACFD1Q9UGQ2 172 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 RFNGQ9Y644 331 aa15.29■□□□□ 0.04
HOXC11-201ENST00000243082 TMEM218A2RU14 115 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 FAM90A27PA6NNH2 459 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 SLC31A2O15432 143 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 ATG12O94817 140 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 ATP6V0CP27449 155 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 F2RL1P55085 397 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 TMEM267Q0VDI3 215 aaPredicted RBP15.28■□□□□ 0.04
HOXC11-201ENST00000243082 LINC01560Q8TB33 94 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 RAB9BQ9NP90 201 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 PSENENQ9NZ42 101 aa15.28■□□□□ 0.04
HOXC11-201ENST00000243082 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.27■□□□□ 0.04
HOXC11-201ENST00000243082 TMEM178BH3BS89 294 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 ITGB1BP1O14713 200 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 C1QL1O75973 258 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 APOC3P02656 99 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 GRNP28799 593 aaKnown RBP15.27■□□□□ 0.04
HOXC11-201ENST00000243082 FHITP49789 147 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 TAS2R30P59541 319 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 UBE2KP61086 200 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 TNFRSF9Q07011 255 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 RPL39P5Q59GN2 51 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 STX12Q86Y82 276 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 CORO2AQ92828 525 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 LEAP2Q969E1 77 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 TSNAXQ99598 290 aaKnown RBP15.27■□□□□ 0.04
HOXC11-201ENST00000243082 ATP5SQ99766 215 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 LINC00574Q9H8X3 128 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 HSPB7Q9UBY9 170 aa15.27■□□□□ 0.04
HOXC11-201ENST00000243082 TRAV38-1A0A0B4J264 116 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 RAB29O14966 203 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 TMPRSS2O15393 492 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 RAB5CP51148 216 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 CT45A1Q5HYN5 189 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 C1orf229Q6ZS94 237 aaPredicted RBP15.27■□□□□ 0.03
HOXC11-201ENST00000243082 CT45A3Q8NHU0 189 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 CD300LFQ8TDQ1 290 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 LAMP3Q9UQV4 416 aa15.27■□□□□ 0.03
HOXC11-201ENST00000243082 TANC2Q9HCD6 1990 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms