RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TTC3P53804 2025 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 PSG6Q00889 435 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 SPINK9Q5DT21 86 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 KIR2DS5A0A0G2JLQ3 304 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 A0A0G2JNG1 304 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 KIR2DS3K7RE56 304 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 Q0VG73 95 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 KIR2DS5Q14953 304 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 SPANXA1Q9NS26 97 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 ARL14EPLP0DKL9 152 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 STXBP6Q8NFX7 210 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 FBXL7Q9UJT9 491 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 ZNF137PP52743 207 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-201ENST00000236192 LYSMD4Q5XG99 296 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 FBLN5Q9UBX5 448 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 A0A087WV48 116 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 C1QTNF9BB2RNN3 333 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 APOMO95445 188 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 CA7P43166 264 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 PSMB2P49721 201 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 CBLN3Q6UW01 205 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 PERPQ96FX8 193 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 GRAMD2BQ96HH9 432 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 CDX2Q99626 313 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-201ENST00000236192 PRKNO60260 465 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-201ENST00000236192 UBE2L3P68036 154 aaKnown RBP11.09□□□□□ -0.63
VAMP4-201ENST00000236192 C2orf27AQ580R0 203 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 LRTM2Q8N967 370 aa11.09□□□□□ -0.63
VAMP4-201ENST00000236192 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-201ENST00000236192 SSBP4Q9BWG4 385 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-201ENST00000236192 CEBPBP17676 345 aa11.08□□□□□ -0.63
VAMP4-201ENST00000236192 STPG1Q5TH74 334 aa11.08□□□□□ -0.63
VAMP4-201ENST00000236192 LHFPL1Q86WI0 220 aa11.08□□□□□ -0.63
VAMP4-201ENST00000236192 ZDHHC23Q8IYP9 409 aa11.08□□□□□ -0.63
VAMP4-201ENST00000236192 OR2M7Q8NG81 312 aa11.08□□□□□ -0.63
VAMP4-201ENST00000236192 BAHD1Q8TBE0 780 aaPredicted RBP11.08□□□□□ -0.63
VAMP4-201ENST00000236192 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.63
VAMP4-201ENST00000236192 IGLV1-36A0A0B4J1U3 117 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 TMEM262E9PQX1 116 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 SUB1P53999 127 aaKnown RBP eCLIP11.08□□□□□ -0.64
VAMP4-201ENST00000236192 PIGYQ3MUY2 71 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 ZNF525Q8N782 197 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 GALMQ96C23 342 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 IL36RNQ9UBH0 155 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 COL4A1P02462 1669 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 KBTBD11-OT1A0A1B0GTJ5 212 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 SH2D1BO14796 132 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 MYBPHQ13203 477 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 CD300EQ496F6 205 aaPredicted RBP11.08□□□□□ -0.64
VAMP4-201ENST00000236192 OR52E5Q8NH55 327 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 SLC25A40Q8TBP6 338 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 LSM10Q969L4 123 aaKnown RBP11.08□□□□□ -0.64
VAMP4-201ENST00000236192 ZNF319Q9P2F9 582 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 SMIM17P0DL12 118 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 C9orf40Q8IXQ3 194 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 C8orf44Q96CB5 159 aa11.08□□□□□ -0.64
VAMP4-201ENST00000236192 A8MWL6 223 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 PGLYRP1O75594 196 aaPredicted RBP11.07□□□□□ -0.64
VAMP4-201ENST00000236192 GOSR1O95249 250 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 CD46P15529 392 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 IGFBP7Q16270 282 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 AAED1Q7RTV5 226 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 ANKRD33Q7Z3H0 272 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 HIST1H4GQ99525 98 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 TSSC4Q9Y5U2 329 aaPredicted RBP11.07□□□□□ -0.64
VAMP4-201ENST00000236192 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 IZUMO1RA6ND01 250 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 PROB1E7EW31 1015 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 GZMHP20718 246 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 ATP5G3P48201 142 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 PGPEP1LA6NFU8 196 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 TOMM40O96008 361 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 RSPO2Q6UXX9 243 aaPredicted RBP11.07□□□□□ -0.64
VAMP4-201ENST00000236192 HSD17B10Q99714 261 aaKnown RBP11.07□□□□□ -0.64
VAMP4-201ENST00000236192 MRPL16Q9NX20 251 aaKnown RBP11.07□□□□□ -0.64
VAMP4-201ENST00000236192 COL18A1P39060 1754 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 IGLC7A0M8Q6 106 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 GAGE12HA6NDE8 117 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 IL4P05112 153 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 CTHRC1Q96CG8 243 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 KLHDC3Q9BQ90 382 aa11.07□□□□□ -0.64
VAMP4-201ENST00000236192 A0A1W2PPV9 198 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 PRR32B1ATL7 298 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 CENPWQ5EE01 88 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 OR10D3Q8NH80 312 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 NCBP2LA6PVI3 153 aaKnown RBP11.06□□□□□ -0.64
VAMP4-201ENST00000236192 FAM157AC9JC47 383 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 ZXDAP98168 799 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
VAMP4-201ENST00000236192 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 VN1R4Q7Z5H5 301 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 VSTM2LQ96N03 204 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms