RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 IFNA1P01562 189 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 CHRNA7P36544 502 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 IDH3GP51553 393 aaPredicted RBP10.44□□□□□ -0.74
NUP88-201ENST00000225696 PMS2P11Q13670 270 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 GCSAMLQ5JQS6 135 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 TCEAL6Q6IPX3 200 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 OR10G9Q8NGN4 311 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 OR10G7Q8NGN6 311 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 TMEM170AQ8WVE7 144 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 DERL1Q9BUN8 251 aa10.44□□□□□ -0.74
NUP88-201ENST00000225696 IGKV3D-15A0A087WSY6 115 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 PGPEP1LA6NFU8 196 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 PMS2P5A8MQ11 134 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 NUPR1O60356 82 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 HRASP01112 189 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 CRYAAP02489 173 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 GYPAP02724 150 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 TFF1P04155 84 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 PSMB3P49720 205 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 LHX2P50458 406 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 GNG3P63215 75 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 ZXDAP98168 799 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 ZNF816Q0VGE8 651 aaPredicted RBP10.43□□□□□ -0.74
NUP88-201ENST00000225696 ACTL10Q5JWF8 245 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 ZNF497Q6ZNH5 498 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 TMPRSS7Q7RTY8 843 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 NDUFAF3Q9BU61 184 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 CFAP47Q6ZTR5 3102 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 ANKRD30BLA7E2S9 258 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 B4E171 279 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 NPIPB11E5RHQ5 1161 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 ZG16O60844 167 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 MT-CO3P00414 261 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 WNT2P09544 360 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 TSPAN7P41732 249 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 PDLIM4P50479 330 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 CLDN18P56856 261 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 NRN1LQ496H8 165 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 FFAR4Q5NUL3 377 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 TEX38Q6PEX7 206 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 NUFIP2Q7Z417 695 aaKnown RBP10.43□□□□□ -0.74
NUP88-201ENST00000225696 ZNF573Q86YE8 665 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 TGIF2LYQ8IUE0 185 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 ZNF808Q8N4W9 903 aaPredicted RBP10.43□□□□□ -0.74
NUP88-201ENST00000225696 DEFB123Q8N688 67 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 WDYHV1Q96HA8 205 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 DDA1Q9BW61 102 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 STRADBQ9C0K7 418 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 LIN7CQ9NUP9 197 aaKnown RBP10.43□□□□□ -0.74
NUP88-201ENST00000225696 WASF3Q9UPY6 502 aa10.43□□□□□ -0.74
NUP88-201ENST00000225696 FAM166BA8MTA8 275 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 CFIP05156 583 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 CD33P20138 364 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 CYB561P49447 251 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 ZNF124Q15973 351 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 ALKBH6Q3KRA9 238 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 UBALD2Q8IYN6 164 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 TMEM256Q8N2U0 113 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 ZNF114Q8NC26 417 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 OR2T10Q8NGZ9 312 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 THOC3Q96J01 351 aaKnown RBP10.42□□□□□ -0.74
NUP88-201ENST00000225696 OR5B12Q96R08 314 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 PARD6GQ9BYG4 376 aaPredicted RBP10.42□□□□□ -0.74
NUP88-201ENST00000225696 HSPB7Q9UBY9 170 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 CTXND1A0A1B0GTU2 59 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 ODAMA1E959 279 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 TMEM250H0YL14 139 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 NTN3O00634 580 aaPredicted RBP10.42□□□□□ -0.74
NUP88-201ENST00000225696 S1PR2O95136 353 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 BTNL3Q6UXE8 466 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 LINC00596Q86U02 117 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 IER2Q9BTL4 223 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 LINC00470Q9BZP3 86 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 OR6C3Q9NZP0 311 aa10.42□□□□□ -0.74
NUP88-201ENST00000225696 SMG1Q96Q15 3661 aaKnown RBP10.41□□□□□ -0.74
NUP88-201ENST00000225696 C17orf98A8MV24 154 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 CDIPTO14735 213 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 PSPNO60542 156 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 GGCTO75223 188 aaKnown RBP10.41□□□□□ -0.74
NUP88-201ENST00000225696 MPLP40238 635 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 MAGEA5P43359 124 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 UBE2G2P60604 165 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 PAX5Q02548 391 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 TIPARPQ7Z3E1 657 aaKnown RBP10.41□□□□□ -0.74
NUP88-201ENST00000225696 SCCPDHQ8NBX0 429 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 NEU1Q99519 415 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 NPCDR1Q9BY65 106 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 PILRBQ9UKJ0 227 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 TP53TG5Q9Y2B4 290 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 MED13Q9UHV7 2174 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 P0C879 139 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 IL3RAP26951 378 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 HOXA6P31267 233 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 ATP5G3P48201 142 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 SLC10A1Q14973 349 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 FAM78BQ5VT40 261 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 LRP11Q86VZ4 500 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 MRPL41Q8IXM3 137 aaKnown RBP10.41□□□□□ -0.74
NUP88-201ENST00000225696 Q8N7P7 452 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 OR52L2PQ8NGH6 319 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms