RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gm3550W4VSN7 160 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 DysfQ9ESD7 2090 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Hsbp1l1B2RXB2 72 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm5225J3QPL3 108 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc18a3O35304 530 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Cd74P04441 279 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 McptlQ00356 246 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Fbxw22Q5XG67 466 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Smug1Q6P5C5 279 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 RimklaQ6PFX8 380 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gpr137bQ8BNQ3 385 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 SdhaQ8K2B3 664 aaKnown RBP5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmem234Q8R1E7 140 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Mitd1Q8VDV8 249 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1143Q8VEU8 314 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr827Q8VEV5 322 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr108Q8VFA1 320 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr167Q8VGJ5 312 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Clec2dQ91V08 207 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Ms4a4dQ99N05 225 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 NtmQ99PJ0 344 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Cldn12Q9ET43 244 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmem176bQ9R1Q6 263 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 F5O88783 2183 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Rpl23a-ps3A0A140T8M7 156 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm21761J3QK00 171 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 D430019H16RikJ3QPM6 83 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 NodalP43021 354 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Rpl23aP62751 156 aaKnown RBP5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 G6pd2P97324 513 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Jmjd8Q3TA59 316 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 HpQ61646 347 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Cnot4Q8BT14 575 aaKnown RBP5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Nrn1lQ8C4W3 162 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Klf11Q8K1S5 502 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr494Q8VG07 314 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr922Q8VG50 311 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmem19Q91W52 336 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc25a37Q920G8 338 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Rpl7l1Q9D8M4 246 aaKnown RBP5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Alg2Q9DBE8 415 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Sorcs2Q9EPR5 1159 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Kcnip3Q9QXT8 256 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 RfxankQ9Z205 269 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Lao1B1ARV3 523 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Arl16B1ATY8 173 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 H2-T10F6T1I5 379 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Pira2F8VQ94 680 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 P01804 111 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Bpifa2P07743 235 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Id1P20067 168 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Agtr1bP29755 359 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Slc38a8Q5HZH7 432 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Sox19Q62249 55 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Hnrnpa3Q8BG05 379 aaKnown RBP5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tsen54Q8C2A2 525 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Il34Q8R1R4 235 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Snapc5Q8R2K7 98 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1277Q8VF41 303 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr483Q8VG05 315 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1110Q8VG38 312 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Elp5Q99L85 300 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tbx19Q99ME7 446 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 4933402D24RikQ9D4D3 167 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 GrinaQ9ESF4 345 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 BlnkQ9QUN3 457 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 FetubQ9QXC1 388 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Chd6A3KFM7 2711 aa5.99□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Trav6-7-dv9A0A075B639 125 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm20219A0A1B0GRQ3 87 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm21863J3KMP8 111 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Vmn2r124K7N789 855 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Galr1P56479 348 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Kcnj3P63250 501 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Map2k6P70236 334 aaKnown RBP5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Cd84Q18PI6 329 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmprss11cQ1JRP2 431 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Q24JP4 165 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Cmpk2Q3U5Q7 447 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Surf4Q64310 269 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Flrt1Q6RKD8 674 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr988Q7TRA1 309 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Rnf24Q8BGI1 148 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Zfp3Q8BLB0 497 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Nmnat2Q8BNJ3 307 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Gm5447Q8BPB2 115 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Fam169bQ8CHT6 337 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr980Q8VH08 310 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Stard4Q99JV5 224 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Stpg1Q9D2F5 341 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Q9DAN9 164 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Dll4Q9JI71 686 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 SclyQ9JLI6 432 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Cldn13Q9Z0S4 211 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Igkv19-93A0A0G2JFZ3 115 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1130A0A1L1SQT2 314 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1039A2ARY0 319 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Olfr1129A2AV41 314 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 Tmem182B2RVY9 229 aa5.98□□□□□ -1.45
Bdnf-201ENSMUST00000053317 eef1akmt3D3YWP0 232 aa5.98□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms