RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Bmi1P25916 324 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Cldn18P56857 264 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Gm1123Q1RME4 390 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 CenptQ3TJM4 515 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Q3UUX7 111 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Bahd1Q497V6 772 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Jagn1Q5XKN4 183 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Olfr140Q60878 302 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Neurl3Q8CJC5 254 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Rdh9Q8K5C8 317 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Mfsd6lQ8R3N2 586 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Olfr52Q8VFL0 319 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Abhd17aQ99JW1 310 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 9130008F23RikQ9D2Z6 181 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 4933407L21RikQ9D476 131 aa12.9□□□□□ -0.34
Ushbp1-201ENSMUST00000049184 Kiaa0100Q5SYL3 2234 aa12.9□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm5890A0A140LI04 305 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm4950D3YUM8 205 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Irf2bp2E9Q1P8 570 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Prkar2aP12367 401 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 VtnP29788 478 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Hist1h1bP43276 223 aaKnown RBP12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Il12rb1Q60837 738 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ceacam9Q78T27 234 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1014Q7TR95 305 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1013Q7TR96 305 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr193Q7TS43 309 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Fbxw13Q8BI57 466 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Foxn4Q8K3Q3 521 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Taf9Q8VI33 264 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Mrpl27Q99N92 148 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ccdc54Q9DAL3 329 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Kcnip3Q9QXT8 256 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Eif3iQ9QZD9 325 aaKnown RBP12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 SptbP15508 2128 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ighv6-5A0A0A6YWS9 119 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm42420A0A0J9YUQ2 99 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 CymB7ZWD6 379 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Fam170bE9PXT9 378 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm5225J3QPL3 108 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm8024L7N2E0 100 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 PtgfrP43117 366 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Sesn1P58006 492 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 PjvkQ0ZLH2 352 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rhox4gQ2MDF7 205 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rhox4dQ2MDG0 205 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rhox4eQ504P9 205 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr324Q5NCC7 333 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Taar8bQ5QD06 344 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1131Q7TR45 309 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Wbp1lQ8BGW2 348 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Galnt14Q8BVG5 550 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1170Q8VFG1 316 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1447Q8VFX3 309 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr796Q8VGJ1 310 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 TirapQ99JY1 241 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Bcl2l14Q9CPT0 328 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Atg12Q9CQY1 141 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Cdk20Q9JHU3 346 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rhox4bQ9JI43 205 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Fbln5Q9WVH9 448 aa12.89□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rpl23a-ps3A0A140T8M7 156 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr204E9Q8M0 305 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r128L7N2B4 307 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Pitx3O35160 302 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tbx15O70306 602 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Dhrs3O88876 302 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Lefty2P57785 368 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rpl23aP62751 156 aaKnown RBP12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Onecut2Q6XBJ3 505 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 TbceQ8CIV8 524 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tmem150bQ8R218 238 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1295Q8VF48 312 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr860Q8VFF7 317 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rpp14Q9CQH8 122 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rtl8cQ9D6I0 112 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Prss21Q9JHJ7 324 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Fbxl17Q9QZN1 701 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rps2-ps6A0A140T8L5 221 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tmem240B2RWJ3 173 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Zfp688E9Q5M9 274 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr62L7MU75 315 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Hist1h2bfP10853 126 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 PdgfbP31240 241 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ly6fP35460 134 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 S1pr2P52592 352 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tango2P54797 276 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rims4P60191 269 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Hist1h2bbQ64475 126 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr923Q7TRB9 317 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Upk3bQ80YF6 275 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ssxb2Q8C5Z3 165 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Hist1h2bkQ8CGP1 126 aaKnown RBP12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Hist1h2bpQ8CGP2 126 aaKnown RBP12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Adhfe1Q8R0N6 465 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1201Q8VGF5 307 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr340Q8VGL0 312 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tm4sf5Q91XF2 196 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Xcr1Q9R0M1 322 aa12.88□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1029A2ATE0 324 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms