RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 B3GNT2Q9Z222 397 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 4930412O13RikQ9D5M9 106 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Tex43Q9D9I1 141 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Ccl8Q9Z121 97 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Adamts9E9PUN6 1931 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr418A0A140T8J6 310 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr1490A0A1L1SVH0 321 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Gm9772F6XPD8 135 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Pet117P0DJF2 80 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 CtdsplP58465 276 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Timm8bP62077 83 aaKnown RBP10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Crebl2Q32M00 123 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr305Q7TS02 319 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr259Q7TS20 312 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Nanos1Q80WY3 267 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr1475Q8VEV6 314 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Rab1bQ9D1G1 201 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Sectm1bQ9JL59 212 aa10.39□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Cdc20bD3Z3I0 519 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Rab5bP61021 215 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Pate2Q3UW31 111 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Ubtd1Q91WB7 227 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Kcnip2Q9JJ69 270 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Gm5901D3YVJ1 333 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Smim18J3QNP2 93 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Spsb2O88838 264 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Hsf1P38532 525 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Scgb2b24Q7M747 112 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Vmn1r225Q8R2A5 298 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Tmem144Q8VEH0 348 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Galnt11Q921L8 608 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Rgs19Q9CX84 216 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Trex2Q9R1A9 236 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Ccr9Q9WUT7 369 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Cep290Q6A078 2472 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Zfp2P08043 459 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Sftpa1P35242 248 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Shc1P98083 579 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Tbrg1Q3UB74 406 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Plk3Q60806 631 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Phox2aQ62066 280 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Slc25a16Q8C0K5 332 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 C1saQ8CG14 688 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Eaf1Q9D4C5 268 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Ergic1Q9DC16 290 aaKnown RBP10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Tmsb15aA2AEH9 79 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr628K7N6B2 316 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Fgfbp1O70514 251 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Q8C4X7 151 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 AfmidQ8K4H1 305 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 RbpmsQ9WVB0 197 aaKnown RBP10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 SnapinQ9Z266 136 aa10.38□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Vma21Q78T54 101 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 BmperQ8CJ69 685 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr1272Q8VGN8 308 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr746E9Q840 314 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Cryba1P02525 198 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Sod1P08228 154 aaKnown RBP10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Ier2P17950 221 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Srsf6Q3TWW8 339 aaKnown RBP10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr141Q60880 325 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Slc46a1Q6PEM8 459 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Vmn1r233Q8R294 319 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Aadacl3A2A7Z8 408 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 PhyhO35386 338 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Kcnj3P63250 501 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Rbp4Q00724 201 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Samd12Q0VE29 161 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Ndufb6Q3UIU2 128 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Cstl1Q80Y72 140 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Comtd1Q8BIG7 262 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Ripply3Q924S9 152 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Epdr1Q99M71 224 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Mrpl43Q99N89 183 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Rpp14Q9CQH8 122 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Xrcc2Q9CX47 278 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Hcfc1r1Q9CYQ5 120 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Gm13547A2ARC0 163 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Colca2F8VPY8 239 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 NgpO08692 167 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Wnt2bO70283 389 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 TifabQ8JZM6 147 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Neil3Q8K203 606 aaKnown RBP10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr168Q8VF05 312 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr167Q8VGJ5 312 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Mtco2P00405 227 aaKnown RBP10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Prss2P07146 246 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr1462Q8VFW3 307 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Fkbp11Q9D1M7 201 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Tmem54Q9D7S1 219 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Pde4dipQ80YT7 2224 aa10.37□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr1223A0A1L1SU13 311 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Hoxb2P0C1T1 354 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 AmbpQ07456 349 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Cfhr1Q61406 343 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Foxs1Q61574 329 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 PtafrQ62035 341 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Spock1Q62288 442 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Olfr358Q7TRY5 330 aa10.36□□□□□ -0.75
Pcif1-201ENSMUST00000041643 Lrfn4Q80XU8 636 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms