RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 RPL39P5Q59GN2 51 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 FAM131AQ6UXB0 335 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 TMEM91Q6ZNR0 172 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 MYOZ3Q8TDC0 251 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 ABHD14BQ96IU4 210 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 B9D2Q9BPU9 175 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 GNB4Q9HAV0 340 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 AK3Q9UIJ7 227 aa10.85□□□□□ -0.67
LINC00339-211ENST00000641009 SEC14L6B5MCN3 397 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 KIAA0141Q14154 515 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-211ENST00000641009 C9orf66Q5T8R8 295 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 LIN54Q6MZP7 749 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 TMEM65Q6PI78 240 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 GLDNQ6ZMI3 551 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-211ENST00000641009 NPBQ8NG41 125 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 OR5B12Q96R08 314 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 PLGRKTQ9HBL7 147 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 PIPOXQ9P0Z9 390 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 SLC23A1Q9UHI7 598 aa10.84□□□□□ -0.67
LINC00339-211ENST00000641009 AK6Q9Y3D8 172 aaKnown RBP10.84□□□□□ -0.67
LINC00339-211ENST00000641009 TRAV41A0A0B4J266 112 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 SLC17A2O00624 439 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 RAB29O14966 203 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 RAMP3O60896 148 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 NDUFA3O95167 84 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 IGLV1-40P01703 118 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 CT45A6P0DMU7 189 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 CT45A5P0DMU8 189 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 CT45A7P0DMV0 189 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 ARSBP15848 533 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 NDPQ00604 133 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 FAM71F2Q6NXP2 309 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 MOB1BQ7L9L4 216 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 ZNF491Q8N8L2 437 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 PRR25Q96S07 402 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 CHCHD6Q9BRQ6 235 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 URM1Q9BTM9 101 aaKnown RBP10.83□□□□□ -0.68
LINC00339-211ENST00000641009 FBXL15Q9H469 300 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 DUSP21Q9H596 190 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 OR1A1Q9P1Q5 309 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 ZMAT5Q9UDW3 170 aaKnown RBP10.83□□□□□ -0.68
LINC00339-211ENST00000641009 SCOCQ9UIL1 159 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 TPRKBQ9Y3C4 175 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 FBXO7Q9Y3I1 522 aa10.83□□□□□ -0.68
LINC00339-211ENST00000641009 I3L521 148 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 ECI1P42126 302 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 CLDN12P56749 244 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 GNB1P62873 340 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 HLA-DRB3P79483 266 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 TPBGQ13641 420 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 ECSCRQ19T08 205 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 ASPHD1Q5U4P2 390 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 FAM89BQ8N5H3 189 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 AGMATQ9BSE5 352 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 CCDC90BQ9GZT6 254 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 VSIG4Q9Y279 399 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 STAB2Q8WWQ8 2551 aa10.82□□□□□ -0.68
LINC00339-211ENST00000641009 TRBV6-6A0A0A6YYG2 114 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 FOXI3A8MTJ6 420 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 H0YJW9 148 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 H7C2Y5 167 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RRHO14718 337 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RGS10O43665 173 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 SCTP09683 121 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 CPEP16870 476 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 CALRP27797 417 aaKnown RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 CEACAM6P40199 344 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 VEGFCP49767 419 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RAB9AP51151 201 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 TMEM50BP56557 158 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 FABP5Q01469 135 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 DCTN2Q13561 401 aaKnown RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RAB11BQ15907 218 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 ZNF260Q3ZCT1 412 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 MINDY2Q8NBR6 621 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 OR1N2Q8NGR9 330 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 CASTOR1Q8WTX7 329 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 ARHGAP5-AS1Q96IT6 56 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 C11orf54Q9H0W9 315 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RIMS4Q9H426 269 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RRP15Q9Y3B9 282 aaKnown RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 A3GALT2U3KPV4 340 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 A0A1W2PN81 502 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 OR5H14A6NHG9 310 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 FCN1O00602 326 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 HSPA12AO43301 675 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 SOX15O60248 233 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 ARL6IP5O75915 188 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 GSTP1P09211 210 aaKnown RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 OR8U8P0C7N1 319 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 SNRPBP14678 240 aaKnown RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 ZBTB25P24278 435 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 CHRNA7P36544 502 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 MAP2K4P45985 399 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 CX3CL1P78423 397 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RUNX1Q01196 453 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 ZNF616Q08AN1 781 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms