RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KDF1Q8NAX2 398 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-221ENST00000640341 OR1L1Q8NH94 360 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 RHOVQ96L33 236 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 SMIM7Q9BQ49 75 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 RIMS4Q9H426 269 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-221ENST00000640341 IL18BPO95998 194 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 HOXA5P20719 270 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 IL2RGP31785 369 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 MDH2P40926 338 aaKnown RBP12.35□□□□□ -0.43
SCARB2-221ENST00000640341 GABRA2P47869 451 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 CDX1P47902 265 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-221ENST00000640341 SLC38A11Q08AI6 406 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF525Q8N782 197 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 GATAD1Q8WUU5 269 aa12.35□□□□□ -0.43
SCARB2-221ENST00000640341 IGKV3D-15A0A087WSY6 115 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 RTP5Q14D33 572 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF585BQ52M93 769 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 WDR86Q86TI4 376 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 SAXO1Q8IYX7 474 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 C1orf87Q8N0U7 546 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 OR52L2PQ8NGH6 319 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 DUXBA0A1W2PPF3 345 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 SOX15O60248 233 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 ZNF737O75373 536 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 TMEM164Q5U3C3 297 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 FAM90A2PQ658T7 463 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 Q8NFD4 153 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 ZDHHC16Q969W1 377 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 MPC1Q9Y5U8 109 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 OR5B21A6NL26 309 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 B4E171 279 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 TSPAN7P41732 249 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 CNEP1R1Q8N9A8 125 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 MRGPRDQ8TDS7 321 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 MALSU1Q96EH3 234 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 WDYHV1Q96HA8 205 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 RTL8AQ9BWD3 113 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 LINC00470Q9BZP3 86 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 OR51I2Q9H344 312 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 CDH20Q9HBT6 801 aa12.34□□□□□ -0.43
SCARB2-221ENST00000640341 A0A1B0GW64 132 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 J3QT63 122 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 IGLV2-14P01704 120 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 UBE2NP61088 152 aaKnown RBP12.33□□□□□ -0.44
SCARB2-221ENST00000640341 SLC10A1Q14973 349 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 Q6ZS49 121 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 C1orf210Q8IVY1 113 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 LIN7CQ9NUP9 197 aaKnown RBP12.33□□□□□ -0.44
SCARB2-221ENST00000640341 CLDN34H7C241 214 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 OR8G1Q15617 311 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 DHRS13Q6UX07 377 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 SLC35E3Q7Z769 313 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 YPEL4Q96NS1 127 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 PSPNO60542 156 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 AGFG2O95081 481 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 EDDM3AQ14507 147 aa12.33□□□□□ -0.44
SCARB2-221ENST00000640341 ZFHX2Q9C0A1 2572 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-221ENST00000640341 IGKV1D-33P01593 117 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 IGKV1-33P01594 117 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 HOXB1P14653 301 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-221ENST00000640341 EGR1P18146 543 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 TBC1D28Q2M2D7 210 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 OR4F5Q8NH21 305 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 SLC25A40Q8TBP6 338 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 ABHD5Q8WTS1 349 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 NINJ1Q92982 152 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 ABHD14BQ96IU4 210 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 KCNIP1Q9NZI2 227 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 SMCO3A2RU48 225 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 NDUFS6O75380 124 aaKnown RBP12.32□□□□□ -0.44
SCARB2-221ENST00000640341 IGHV2-70P01814 119 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 RAC2P15153 192 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 FABP6P51161 128 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 PPP1CBP62140 327 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 UBALD2Q8IYN6 164 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 RPP25LQ8N5L8 163 aaKnown RBP12.32□□□□□ -0.44
SCARB2-221ENST00000640341 IL22RA2Q969J5 263 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 SDSLQ96GA7 329 aa12.32□□□□□ -0.44
SCARB2-221ENST00000640341 Q6P435 159 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 TAF15Q92804 592 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCARB2-221ENST00000640341 WDR61Q9GZS3 305 aaKnown RBP12.31□□□□□ -0.44
SCARB2-221ENST00000640341 LAMP3Q9UQV4 416 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
SCARB2-221ENST00000640341 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 LRP5LA4QPB2 252 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 SH2D1BO14796 132 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 ZG16O60844 167 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 UBE2G2P60604 165 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 RPL30P62888 115 aaKnown RBP12.31□□□□□ -0.44
SCARB2-221ENST00000640341 NRN1LQ496H8 165 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 NCR3LG1Q68D85 454 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 MSL2Q9HCI7 577 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 S1PR2O95136 353 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 CEACAM1P13688 526 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 PRAMEF6Q5VXH4 476 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms