RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SLC25A33Q9BSK2 321 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 GPR146Q96CH1 333 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 MRPL18Q9H0U6 180 aaKnown RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 CISD1Q9NZ45 108 aaKnown RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 HOXD4P09016 255 aaPredicted RBP16■□□□□ 0.15
SCARB2-213ENST00000638680 TWIST1Q15672 202 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 ASCL5Q7RTU5 278 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 GPR61Q9BZJ8 451 aa16■□□□□ 0.15
SCARB2-213ENST00000638680 CRXO43186 299 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-213ENST00000638680 TSPAN2O60636 221 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 MT-ND6P03923 174 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 ZNF645Q8N7E2 425 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 HIST1H2BAQ96A08 127 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 PILRAQ9UKJ1 303 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 KLF7O75840 302 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-213ENST00000638680 RELBQ01201 579 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 OR4B1Q8NGF8 309 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 OR5R1Q8NH85 324 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 MAFAQ8NHW3 353 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-213ENST00000638680 KCNE5Q9UJ90 142 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 CDX1P47902 265 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-213ENST00000638680 P2RX4Q99571 388 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 TMUB1Q9BVT8 246 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 TNFRSF19Q9NS68 423 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 C4orf51C9J302 202 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 C1orf210Q8IVY1 113 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 FAM117AQ9C073 453 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 HTN1P15515 57 aa15.99■□□□□ 0.15
SCARB2-213ENST00000638680 A0A1W2PQF6 199 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 OR2H2O95918 312 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 CD74P04233 296 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 MESP2Q0VG99 397 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 FAM206AQ9NX38 181 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 SCN3AQ9NY46 2000 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 F2RL2O00254 374 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 HYPMO75409 117 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 RTP5Q14D33 572 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 MARVELD3Q96A59 401 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 RBM14Q96PK6 669 aaKnown RBP15.98■□□□□ 0.15
SCARB2-213ENST00000638680 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.98■□□□□ 0.15
SCARB2-213ENST00000638680 DOCK5Q9H7D0 1870 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 HOXA4Q00056 320 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-213ENST00000638680 TRIP6Q15654 476 aaKnown RBP15.98■□□□□ 0.15
SCARB2-213ENST00000638680 SLC25A47Q6Q0C1 308 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 WDR54Q9H977 334 aa15.98■□□□□ 0.15
SCARB2-213ENST00000638680 CEACAM18A8MTB9 384 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 DANCRP0C864 163 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 CEBPDP49716 269 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-213ENST00000638680 FHITP49789 147 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 MIC13Q5XKP0 118 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 APCDD1LQ8NCL9 501 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 GMPPAQ96IJ6 420 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-213ENST00000638680 ZNF71Q9NQZ8 489 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-213ENST00000638680 A8MWL6 223 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 DDA1Q9BW61 102 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 SLC25A10Q9UBX3 287 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-213ENST00000638680 GAGE10A6NGK3 116 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 MPDU1O75352 247 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 AREGP15514 252 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 SPANXN1Q5VSR9 72 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 TTTY12Q9BZ98 90 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 TRGC1P0CF51 173 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 DMRT1Q9Y5R6 373 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 CSRP3P50461 194 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 SNAI3Q3KNW1 292 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 WFIKKN1Q96NZ8 548 aa15.97■□□□□ 0.15
SCARB2-213ENST00000638680 PQLC2Q6ZP29 291 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 LHFPL6Q9Y693 200 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 IGHV4-34P06331 123 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 G6PC2Q9NQR9 355 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 CDC42EP3Q9UKI2 254 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 M0R3E3 92 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 OR2A4O95047 310 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 AMY1AP04745 511 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 KIR2DL2P43627 348 aaPredicted RBP15.96■□□□□ 0.15
SCARB2-213ENST00000638680 FGFRL1Q8N441 504 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 OR2A7Q96R45 310 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 USP54Q70EL1 1684 aa15.96■□□□□ 0.15
SCARB2-213ENST00000638680 TMEM189A5PLL7 270 aa15.96■□□□□ 0.14
SCARB2-213ENST00000638680 K7N7A8 449 aa15.96■□□□□ 0.14
SCARB2-213ENST00000638680 NAT2P11245 290 aa15.96■□□□□ 0.14
SCARB2-213ENST00000638680 ZP1P60852 638 aa15.96■□□□□ 0.14
SCARB2-213ENST00000638680 MMDQ15546 238 aa15.96■□□□□ 0.14
SCARB2-213ENST00000638680 UQCR10Q9UDW1 63 aa15.96■□□□□ 0.14
SCARB2-213ENST00000638680 CELA2AP08217 269 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 FXYD3Q14802 87 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 GGACTQ9BVM4 153 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 CBLN4Q9NTU7 201 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 C1RLQ9NZP8 487 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 DHRS7CA6NNS2 312 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 AGAP20933 346 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 ZNF501Q96CX3 271 aaPredicted RBP15.95■□□□□ 0.14
SCARB2-213ENST00000638680 PLAUP00749 431 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 SOD3P08294 240 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 ZNF735P0CB33 412 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 C21orf140B9A014 251 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 RPS11P62280 158 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCARB2-213ENST00000638680 PMCHL1Q16048 86 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 POC1AQ8NBT0 407 aa15.95■□□□□ 0.14
SCARB2-213ENST00000638680 TXNDC17Q9BRA2 123 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms