RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 THBS3P49746 956 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 LINC00205P59089 165 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 SLC35B1P78383 322 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 CFHR3Q02985 330 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 DEFB136Q30KP8 78 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 LY6G6FQ5SQ64 297 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 C22orf42Q6IC83 251 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 CD200R1LQ6Q8B3 271 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 MOB1BQ7L9L4 216 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 CMSS1Q9BQ75 279 aaKnown RBP13.9□□□□□ -0.18
PNKP-230ENST00000638016 C12orf4Q9NQ89 552 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 NECAP2Q9NVZ3 263 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 ZNF107Q9UII5 783 aaPredicted RBP13.9□□□□□ -0.18
PNKP-230ENST00000638016 HSF4Q9ULV5 492 aa13.9□□□□□ -0.18
PNKP-230ENST00000638016 CT45A6P0DMU7 189 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 CT45A5P0DMU8 189 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 CT45A7P0DMV0 189 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 KRTAP10-11P60412 298 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 GABARAPL2P60520 117 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 PNLIPRP3Q17RR3 467 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 SPARTQ8N0X7 666 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 OR8H1Q8NGG4 311 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 MRAPQ8TCY5 172 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 MAFIPQ8WZ33 124 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 C11orf54Q9H0W9 315 aaPredicted RBP13.89□□□□□ -0.19
PNKP-230ENST00000638016 RNF150Q9ULK6 438 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 LRRC42Q9Y546 428 aa13.89□□□□□ -0.19
PNKP-230ENST00000638016 TRAV1-2A0A0B4J238 106 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 TRDV1A0A1B0GX56 115 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 IFITM5A6NNB3 132 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 G3V318 75 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 ATP6V0E1O15342 81 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 PROP1O75360 226 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 PSMB9P28065 219 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 CEACAM6P40199 344 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 NDPQ00604 133 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 TEX38Q6PEX7 206 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 DRAXINQ8NBI3 349 aaPredicted RBP13.88□□□□□ -0.19
PNKP-230ENST00000638016 OR56B1Q8NGI3 324 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 KCTD7Q96MP8 289 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 AGMATQ9BSE5 352 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 WSB1Q9Y6I7 421 aa13.88□□□□□ -0.19
PNKP-230ENST00000638016 A0A075B6Q4 140 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 IGHV7-81A0A0B4J1V7 117 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 NBR2O15453 112 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 GNB3P16520 340 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 MYL9P24844 172 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 UBE2UQ5VVX9 321 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 ZNF695Q8IW36 515 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 COMMD1Q8N668 190 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 RAX2Q96IS3 184 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 P2RX4Q99571 388 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 RIMS4Q9H426 269 aaPredicted RBP13.87□□□□□ -0.19
PNKP-230ENST00000638016 PIPOXQ9P0Z9 390 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 ELF5Q9UKW6 265 aaPredicted RBP13.87□□□□□ -0.19
PNKP-230ENST00000638016 RAB22AQ9UL26 194 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 FBXO7Q9Y3I1 522 aa13.87□□□□□ -0.19
PNKP-230ENST00000638016 H0YJW9 148 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 RAB27BO00194 218 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 PDCD5O14737 125 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 RAB29O14966 203 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 HSPA12AO43301 675 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
PNKP-230ENST00000638016 RAB3BP20337 219 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 VDAC1P21796 283 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 C5orf64Q2M2E5 130 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 CXorf66Q5JRM2 361 aaPredicted RBP13.86□□□□□ -0.19
PNKP-230ENST00000638016 RAB3CQ96E17 227 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 RCC1LQ96I51 464 aaKnown RBP13.86□□□□□ -0.19
PNKP-230ENST00000638016 KLK15Q9H2R5 256 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 FBXL15Q9H469 300 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 PARP11Q9NR21 331 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 ZFP57Q9NU63 452 aa13.86□□□□□ -0.19
PNKP-230ENST00000638016 ZNF230Q9UIE0 474 aaPredicted RBP13.86□□□□□ -0.19
PNKP-230ENST00000638016 MFNGO00587 321 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 NDUFA3O95167 84 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 IGHG4P01861 327 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 IGF1P05019 195 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 FCGR3AP08637 254 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 ZBTB25P24278 435 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 RAB25P57735 213 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 FOXE3Q13461 319 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 IGSF11Q5DX21 431 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 FAM71F2Q6NXP2 309 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 NPBQ8NG41 125 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 OR10R2Q8NGX6 335 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 OR51J1Q9H342 316 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 TXNL4BQ9NX01 149 aaKnown RBP13.85□□□□□ -0.19
PNKP-230ENST00000638016 RDH8Q9NYR8 311 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 DNAH9Q9NYC9 4486 aa13.85□□□□□ -0.19
PNKP-230ENST00000638016 WI2-2373I1.2A0A1W2PRP0 233 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 TRDCB7Z8K6 153 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 K7EIL1 84 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 FCN1O00602 326 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 HLA-DRB1P01911 266 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 ELANEP08246 267 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 GSTT2P0CG29 244 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 GSTT2BP0CG30 244 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 PSMB8P28062 276 aa13.84□□□□□ -0.19
PNKP-230ENST00000638016 MYCNOSP40205 109 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms