RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 CCL3L1P16619 93 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 RAB4AP20338 218 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 KRTAP10-9P60411 292 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 ERVK-16P61578 105 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 HNF4GQ14541 408 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 MST1LQ2TV78 715 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 CLLU1Q5K131 121 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 PRAMEF5Q5TYX0 476 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 WDR25Q64LD2 544 aaPredicted RBP7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 SMIM4Q8WVI0 70 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 SLC25A38Q96DW6 304 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 ATP6V0BQ99437 205 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 GFI1Q99684 422 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 MIXL1Q9H2W2 232 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 CALYQ9NYX4 217 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
CACNA1A-254ENST00000637952 B4DSR2 109 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 K7N7A8 449 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 TNFSF12O43508 249 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 SLC25A17O43808 307 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 MPC2O95563 127 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 IGHV2-5P01817 119 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 APOA2P02652 100 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 LINC00614P0C842 121 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 PI3P19957 117 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 MPZP25189 248 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 PPP1CCP36873 323 aaKnown RBP7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 CEACAM3P40198 252 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 CD177Q8N6Q3 437 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 CLDND2Q8NHS1 167 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 FAM216AQ8WUB2 273 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 DEDD2Q8WXF8 326 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 PSMG3-AS1Q96PY0 264 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 HIF1ANQ9NWT6 349 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 HSF4Q9ULV5 492 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 ASPMQ8IZT6 3477 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 WIPF3A6NGB9 483 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 SLC33A1O00400 549 aaPredicted RBP7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 PSPNO60542 156 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 TOX4O94842 621 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 SSTR5P35346 364 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 HLA-DRB3P79483 266 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 ASPHD2Q6ICH7 369 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 OR1L1Q8NH94 360 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 LEAP2Q969E1 77 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 RNF166Q96A37 237 aaPredicted RBP7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 NXF2Q9GZY0 626 aaKnown RBP7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 COMMD9Q9P000 198 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 ZNF222Q9UK12 451 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 IGKV1D-17A0A075B6S4 117 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 M0R1X1 148 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 ARPC1BO15143 372 aaKnown RBP7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 MPPED1O15442 326 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 SCTP09683 121 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 TMEM50BP56557 158 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 ZNF146Q15072 292 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 SSX2Q16385 188 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 ZFP69Q49AA0 526 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 CCDC190Q86UF4 302 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 ZNF695Q8IW36 515 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 OR5AP2Q8NGF4 316 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 OR52L2PQ8NGH6 319 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 LHX4Q969G2 390 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 LURAP1Q96LR2 239 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 GSKIPQ9P0R6 139 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 MTFP1Q9UDX5 166 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 HILPDAQ9Y5L2 63 aa7.16□□□□□ -1.26
CACNA1A-254ENST00000637952 KALRNO60229 2985 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 IGHV4-30-2A0A087WSY4 118 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 TRAV24A0A0B4J272 114 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 A0A1W2PPR1 153 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 A8MV72 311 aaPredicted RBP7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 I3L521 148 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 ARG1P05089 322 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 ADH4P08319 380 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 FCGR3AP08637 254 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 DTYMKP23919 212 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 ZNF260Q3ZCT1 412 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 TMEM155Q4W5P6 130 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 LBHQ53QV2 105 aaPredicted RBP7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 SLC35E4Q6ICL7 350 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 FOXRED2Q8IWF2 684 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 PNKDQ8N490 385 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 RBPMSQ93062 196 aaKnown RBP7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 SLC25A28Q96A46 364 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 LAMA5O15230 3695 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 RNF212BA8MTL3 300 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 ARPC5O15511 151 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 FGF2P09038 288 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 CCR6P51684 374 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 SRSF1Q07955 248 aaKnown RBP eCLIP7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 PLAC9Q5JTB6 97 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 OR13A1Q8NGR1 328 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 Q8TCH9 128 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 GLYATL2Q8WU03 294 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 TM2D1Q9BX74 207 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 RDH8Q9NYR8 311 aa7.15□□□□□ -1.26
CACNA1A-254ENST00000637952 CFAP47Q6ZTR5 3102 aa7.15□□□□□ -1.27
CACNA1A-254ENST00000637952 HLA-DQB1P01920 261 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms