RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 GAB2Q9UQC2 676 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 ERGIC3Q9Y282 383 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 EXOSC1Q9Y3B2 195 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 A3GALT2U3KPV4 340 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 A8MZ25 164 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 LDLRAD4O15165 306 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 ST8SIA5O15466 376 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 RGS11O94810 467 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 BAG2O95816 211 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 CT45A6P0DMU7 189 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 CT45A5P0DMU8 189 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 CT45A7P0DMV0 189 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 SRSF7Q16629 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 OR2AK2Q8NG84 335 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 GALMQ96C23 342 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 RHOVQ96L33 236 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 DERL3Q96Q80 235 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 SULT4A1Q9BR01 284 aa9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 PARP12Q9H0J9 701 aaKnown RBP9.31□□□□□ -0.92
CACNA1A-250ENST00000637809 H0YJW9 148 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 HSPA12AO43301 675 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 IGLV1-51P01701 117 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 MYL12AP19105 171 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 CAPGP40121 348 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 VEGFCP49767 419 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 PITPNAQ00169 270 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 DOC2BQ14184 412 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 AKIRIN2Q53H80 203 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 ACTBL2Q562R1 376 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 RPL39P5Q59GN2 51 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 PYHIN1Q6K0P9 492 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 PPP1R27Q86WC6 154 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 OR5AN1Q8NGI8 311 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 FAM46BQ96A09 425 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 FLYWCH2Q96CP2 140 aaKnown RBP9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 OR4C12Q96R67 309 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 UQCC2Q9BRT2 126 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 FAM103A1Q9BTL3 118 aaKnown RBP9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 SLC23A1Q9UHI7 598 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 LRRC42Q9Y546 428 aa9.3□□□□□ -0.92
CACNA1A-250ENST00000637809 ALMS1Q8TCU4 4167 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 IRGMA1A4Y4 181 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 OR5H14A6NHG9 310 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 RAB29O14966 203 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 TMEM267Q0VDI3 215 aaPredicted RBP9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 ZNF880Q6PDB4 577 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 ZNF562Q6V9R5 426 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 GLDNQ6ZMI3 551 aaPredicted RBP9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 ADAMTSL5Q6ZMM2 481 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 NKAIN3Q8N8D7 197 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 LFNGQ8NES3 379 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 ISOC1Q96CN7 298 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 TMEM80Q96HE8 168 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 MS4A10Q96PG2 267 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 AGMATQ9BSE5 352 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 FAAP24Q9BTP7 215 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 CNOT2Q9NZN8 540 aaKnown RBP9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 PIPOXQ9P0Z9 390 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 GHRLQ9UBU3 117 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 STUB1Q9UNE7 303 aa9.29□□□□□ -0.92
CACNA1A-250ENST00000637809 PNMA8CA0A1B0GUJ8 204 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 ARPC1BO15143 372 aaKnown RBP9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 PROP1O75360 226 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 NAPSAO96009 420 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 TPPP2P59282 170 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 PLGLAQ15195 96 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 PSG5Q15238 335 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 UNQ5815/PRO19632Q6UWF5 114 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 IL34Q6ZMJ4 242 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 C6orf201Q7Z4U5 140 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 PQLC1Q8N2U9 271 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 SVOPQ8N4V2 548 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 IL1F10Q8WWZ1 152 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 ABHD14BQ96IU4 210 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 CLCC1Q96S66 551 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 RNF5Q99942 180 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 SLA2Q9H6Q3 261 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 S100A14Q9HCY8 104 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 SMPD3Q9NY59 655 aaPredicted RBP9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 STEAP1Q9UHE8 339 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 RNF150Q9ULK6 438 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 WASHC3Q9Y3C0 194 aa9.28□□□□□ -0.92
CACNA1A-250ENST00000637809 DYNC1I1O14576 645 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 ITGB1BP1O14713 200 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 RBBP9O75884 186 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 CA2P00918 260 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 IGKV1-16P04430 117 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 TFAP2AP05549 437 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 CD1AP06126 327 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 GSTP1P09211 210 aaKnown RBP9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 HTR2CP28335 458 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 MC5RP33032 325 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 RPS27AP62979 156 aaKnown RBP9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 SSBP2P81877 361 aaPredicted RBP9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 KLF5Q13887 457 aaPredicted RBP9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 ZNF555Q8NEP9 628 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.93
CACNA1A-250ENST00000637809 GGHQ92820 318 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms