RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	OR10G3	Q8NGC4	313 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306	PSMF1	Q92530	271 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306	SGCZ	Q96LD1	299 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306	CLUHP3	Q96NS8	147 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306	MOB1A	Q9H8S9	216 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306	ZDHHC11	Q9H8X9	412 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306	B3GALT1	Q9Y5Z6	326 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306	KIF26B	Q2KJY2	2108 aa		9.2	□□□□□ -0.94
CHD2-223	ENST00000636306		A0A1B0GUS0	222 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	NKX2-6	A6NCS4	301 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	AQP7P3	A6NL99	342 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	C17orf51	A8MQB3	221 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	SIRPB1	O00241	398 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	TLX3	O43711	291 aa	Predicted RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	TRAF3IP2	O43734	574 aa	Predicted RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	CNOT4	O95628	575 aa	Known RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	GPX1	P07203	203 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	PSG1	P11464	419 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	COX6A1	P12074	109 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	CTLA4	P16410	223 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	BLVRB	P30043	206 aa	Predicted RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	OTX1	P32242	354 aa	Predicted RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	PTGDS	P41222	190 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	OR3A4P	P47883	348 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	ZNF133	P52736	654 aa	Predicted RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	MRPS34	P82930	218 aa	Known RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	ID3	Q02535	119 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	PAX2	Q02962	417 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	PMCHL1	Q16048	86 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	CLEC12B	Q2HXU8	276 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	DCAF12	Q5T6F0	453 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	C16orf47	Q6ZP98	133 aa	Predicted RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	ZIC4	Q8N9L1	334 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	OR52L2P	Q8NGH6	319 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	RNF133	Q8WVZ7	376 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	SPSB1	Q96BD6	273 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	KCNK17	Q96T54	332 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	PBOV1	Q9GZY1	135 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	MEGF9	Q9H1U4	602 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	SZT2	Q5T011	3432 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	ZNF891	A8MT65	544 aa	Predicted RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	PATE3	B3GLJ2	98 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	MS4A18	H0YCH9	400 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	SSSCA1	O60232	199 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	IGHG1	P01857	330 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	SERPINA7	P05543	415 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	ZNF17	P17021	662 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	CD33	P20138	364 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	PRRX1	P54821	245 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	CLDN15	P56746	228 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	CLRN1	P58418	232 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	FMOD	Q06828	376 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	MYBPH	Q13203	477 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	RTP5	Q14D33	572 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	MS4A18	Q3C1V0	323 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	C19orf35	Q6ZS72	473 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	BAGE3	Q86Y29	109 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	BAGE2	Q86Y30	109 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	ZNF596	Q8TC21	504 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	MRPL30	Q8TCC3	161 aa	Known RBP	9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	SSC4D	Q8WTU2	575 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	FAM216A	Q8WUB2	273 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	IMMP1L	Q96LU5	166 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306	LRFN3	Q9BTN0	628 aa		9.19	□□□□□ -0.94
CHD2-223	ENST00000636306		A0A0C4DFX4	3053 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	XIRP2	A4UGR9	3374 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	IGKV1D-8	A0A087WSZ0	117 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	TRBV9	A0A0B4J1U6	114 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	PIGBOS1	A0A0B4J2F0	54 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	GJE1	A6NN92	205 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306		H3BML4	177 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	TMPRSS2	O15393	492 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	PHF1	O43189	567 aa	Predicted RBP	9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	CST7	O76096	145 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	DKK1	O94907	266 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	JMJD7	P0C870	316 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	FOXL2	P58012	376 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	KRTDAP	P60985	99 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	OR4A47	Q6IF82	309 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	NEIL1	Q96FI4	390 aa	Predicted RBP	9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	OXGR1	Q96P68	337 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	ZNF286A	Q9HBT8	521 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	KLHL13	Q9P2N7	655 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	COA3	Q9Y2R0	106 aa	Predicted RBP	9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	TIMM9	Q9Y5J7	89 aa		9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	9.18	□□□□□ -0.94
CHD2-223	ENST00000636306	CABIN1	Q9Y6J0	2220 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	LOC101059948	A0A1B0GTJ6	334 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	LOC102725191	A0A1B0GVB3	256 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	C2orf72	A6NCS6	295 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306		G3V4G9	280 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306		M0R296	226 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	WNT2	P09544	360 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	DSCR4	P56555	118 aa	Predicted RBP	9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	ZNF154	Q13106	437 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	SPIN3	Q5JUX0	258 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	FFAR4	Q5NUL3	377 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	ZNF468	Q5VIY5	522 aa	Predicted RBP	9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	PRAMEF20	Q5VT98	475 aa		9.17	□□□□□ -0.94
CHD2-223	ENST00000636306	ASCL4	Q6XD76	172 aa		9.17	□□□□□ -0.94

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