RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TMEM65Q6PI78 240 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 ETV3LQ6ZN32 361 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 FAM89BQ8N5H3 189 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 OR8U1Q8NH10 309 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 FAM3DQ96BQ1 224 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 CYYR1Q96J86 154 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 CMSS1Q9BQ75 279 aaKnown RBP14.9□□□□□ -0.02
CLN6-213ENST00000636212 Q9H521 79 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 SLC23A1Q9UHI7 598 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 ZNF580Q9UK33 172 aa14.9□□□□□ -0.02
CLN6-213ENST00000636212 A0A0A6YYD4 124 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 ST8SIA5O15466 376 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 DENRO43583 198 aaKnown RBP14.89□□□□□ -0.03
CLN6-213ENST00000636212 MYL9P24844 172 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 MC5RP33032 325 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 CEACAM6P40199 344 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 CDX1P47902 265 aaPredicted RBP14.89□□□□□ -0.03
CLN6-213ENST00000636212 C2orf76Q3KRA6 126 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 C18orf65Q6ZTR6 163 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 GFI1Q99684 422 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 IFI27L2Q9H2X8 130 aa14.89□□□□□ -0.03
CLN6-213ENST00000636212 OR5H14A6NHG9 310 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 CCL24O00175 119 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 ITGB1BP1O14713 200 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 IGHG4P01861 327 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 HLA-DRB1P01911 266 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 CLDN12P56749 244 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 PLGLAQ15195 96 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 LIN54Q6MZP7 749 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 ARHGAP5-AS1Q96IT6 56 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 KCTD7Q96MP8 289 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 P2RX4Q99571 388 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 PECRQ9BY49 303 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 RAB22AQ9UL26 194 aa14.88□□□□□ -0.03
CLN6-213ENST00000636212 H7C2Y5 167 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 GSTP1P09211 210 aaKnown RBP14.87□□□□□ -0.03
CLN6-213ENST00000636212 GADD45AP24522 165 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 KIR2DS1Q14954 304 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 C5orf64Q2M2E5 130 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 DEFB121Q5J5C9 76 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 HES5Q5TA89 166 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 FAM131AQ6UXB0 335 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 RNF152Q8N8N0 203 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 HDHD3Q9BSH5 251 aaPredicted RBP14.87□□□□□ -0.03
CLN6-213ENST00000636212 OR51J1Q9H342 316 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 Q9N2K0 584 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 PARP11Q9NR21 331 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 ZNF221Q9UK13 617 aa14.87□□□□□ -0.03
CLN6-213ENST00000636212 RBBP9O75884 186 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 CD3GP09693 182 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 HOXD3P31249 432 aaPredicted RBP14.86□□□□□ -0.03
CLN6-213ENST00000636212 RPL39P5Q59GN2 51 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 LCNL1Q6ZST4 164 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 NPBQ8NG41 125 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 OR5M8Q8NGP6 311 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 RAX2Q96IS3 184 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 ABHD14BQ96IU4 210 aa14.86□□□□□ -0.03
CLN6-213ENST00000636212 TRAV1-2A0A0B4J238 106 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 ATP6V0E1O15342 81 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 MRPS14O60783 128 aaKnown RBP14.85□□□□□ -0.03
CLN6-213ENST00000636212 CNTFRP26992 372 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 TMEM50BP56557 158 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 GABARAPL2P60520 117 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 CFHR3Q02985 330 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 EGFEM1PQ0D2K5 195 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 DCTN2Q13561 401 aaKnown RBP14.85□□□□□ -0.03
CLN6-213ENST00000636212 C4orf3Q8WVX3 66 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 RAB3CQ96E17 227 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 RBMXL1Q96E39 390 aaKnown RBP14.85□□□□□ -0.03
CLN6-213ENST00000636212 DUX3Q96PT4 197 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 C11orf54Q9H0W9 315 aaPredicted RBP14.85□□□□□ -0.03
CLN6-213ENST00000636212 NDUFB11Q9NX14 153 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 OR1A1Q9P1Q5 309 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 WASHC3Q9Y3C0 194 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 WSB1Q9Y6I7 421 aa14.85□□□□□ -0.03
CLN6-213ENST00000636212 TRAV41A0A0B4J266 112 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 TMEM272A0A1B0GTI8 110 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 FOXI3A8MTJ6 420 aaPredicted RBP14.84□□□□□ -0.03
CLN6-213ENST00000636212 TRDCB7Z8K6 153 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 NDUFA3O95167 84 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 SCTP09683 121 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 CT45A6P0DMU7 189 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 CT45A5P0DMU8 189 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 CT45A7P0DMV0 189 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 RAB3BP20337 219 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 PSMB8P28062 276 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 SERPINB10P48595 397 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 SSX1Q16384 188 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 OR4A4PQ8NGN8 299 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 RITA1Q96K30 269 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 RNF5Q99942 180 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 NOTCH3Q9UM47 2321 aa14.84□□□□□ -0.03
CLN6-213ENST00000636212 IGHV7-81A0A0B4J1V7 117 aa14.83□□□□□ -0.04
CLN6-213ENST00000636212 TRDV1A0A1B0GX56 115 aa14.83□□□□□ -0.04
CLN6-213ENST00000636212 METTL21EPA6NDL7 271 aa14.83□□□□□ -0.04
CLN6-213ENST00000636212 K7EIL1 84 aa14.83□□□□□ -0.04
CLN6-213ENST00000636212 RRHO14718 337 aa14.83□□□□□ -0.04
CLN6-213ENST00000636212 APOA2P02652 100 aa14.83□□□□□ -0.04
CLN6-213ENST00000636212 GALP22466 123 aa14.83□□□□□ -0.04
CLN6-213ENST00000636212 KRTAP10-11P60412 298 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms