RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MMP24Q9Y5R2 645 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 POLEQ07864 2286 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 TANC2Q9HCD6 1990 aa4.63□□□□□ -1.67
NEK3-211ENST00000629912 MAP1BP46821 2468 aaKnown RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 RP1L1Q8IWN7 2480 aaPredicted RBP4.63□□□□□ -1.67
NEK3-211ENST00000629912 BSNQ9UPA5 3926 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 IGHV3OR15-7A0A075B7D8 119 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 TRAV38-1A0A0B4J264 116 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 TRGV8A0A0C4DH27 118 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 A0A0G2JRQ6 117 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 IGSF23A1L1A6 192 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 LRRC30A6NM36 301 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 SHISA9B4DS77 424 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 E7EQL1 145 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 LGALS8O00214 317 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 WRBO00258 174 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 RAB29O14966 203 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 SIGLEC5O15389 551 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 TXNL1O43396 289 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 SYNGR2O43760 224 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 TMEM50AO95807 157 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 CLDN1O95832 211 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 TFF1P04155 84 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 DANCRP0C864 163 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 P0C879 139 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 CHRNB4P30926 498 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 APOBEC3AP31941 199 aaPredicted RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 CD80P33681 288 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 PPP1CCP36873 323 aaKnown RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 BRWD1-AS2P59051 145 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 RPL23AP62750 156 aaKnown RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 HOXA4Q00056 320 aaPredicted RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 PJVKQ0ZLH3 352 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 EFNB3Q15768 340 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 C17orf58Q2M2W7 97 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 TUSC1Q2TAM9 212 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 BTNL8Q6UX41 500 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 IL34Q6ZMJ4 242 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 ODF3L1Q8IXM7 274 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 COMMD1Q8N668 190 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 BOLLQ8N9W6 283 aaKnown RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 ZNRF1Q8ND25 227 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 OR10A7Q8NGE5 316 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 OR1S2Q8NGQ3 325 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 RFESDQ8TAC1 157 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 UBALD1Q8TB05 177 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 RNASE6Q93091 150 aaKnown RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 C5orf30Q96GV9 206 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 GAFA1Q96PS6 74 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 TSNAXQ99598 290 aaKnown RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 DCTN5Q9BTE1 182 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 MAGT1Q9H0U3 335 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 MS4A5Q9H3V2 200 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 MMP26Q9NRE1 261 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.62□□□□□ -1.67
NEK3-211ENST00000629912 NDRG3Q9UGV2 375 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 NUP50Q9UKX7 468 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 KCNS2Q9ULS6 477 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 LAMP3Q9UQV4 416 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 WSB1Q9Y6I7 421 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 DMXL2Q8TDJ6 3036 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 ASPMQ8IZT6 3477 aa4.62□□□□□ -1.67
NEK3-211ENST00000629912 PIEZO2Q9H5I5 2752 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 TRGV10A0A0A0MS01 117 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 KBTBD11-OT1A0A1B0GTJ5 212 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 TMEM218A2RU14 115 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 ZNF729A6NN14 1252 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 FAM90A9PA6NNJ1 464 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 C17orf98A8MV24 154 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 ZNF705EA8MWA4 302 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 B9A039 149 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 UMAD1C9J7I0 102 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 TMEM178BH3BS89 294 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 TRIM77I1YAP6 450 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 RBFOX2O43251 390 aaKnown RBP eCLIP4.61□□□□□ -1.67
NEK3-211ENST00000629912 SSSCA1O60232 199 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 PROP1O75360 226 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 MED6O75586 246 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 DFFBO76075 338 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 CLDN14O95500 239 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 FSTL3O95633 263 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 LY86O95711 162 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 CYB5R3P00387 301 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 CD3EP07766 207 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 OR8U8P0C7N1 319 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 ZNF16P17020 682 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 DUTP33316 252 aaKnown RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 SSTR5P35346 364 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 KIR2DS2P43631 304 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 SULT1A1P50225 295 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 RAB7AP51149 207 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 MEF2CQ06413 473 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 EDDM3AQ14507 147 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 ZNF266Q14584 549 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 AARDQ4LEZ3 155 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 MIDNQ504T8 468 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 C10orf91Q5T1B1 145 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 FAM53AQ6NSI3 398 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 CLEC9AQ6UXN8 241 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 DMRTC2Q8IXT2 367 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms