RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 FAM71F2Q6NXP2 309 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 OR13C5Q8NGS8 318 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 RHOXF1Q8NHV9 184 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 MRPL30Q8TCC3 161 aaKnown RBP11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 RDH12Q96NR8 316 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 CLCC1Q96S66 551 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 MRPS18AQ9NVS2 196 aaKnown RBP11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 STEAP1Q9UHE8 339 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 LRRC42Q9Y546 428 aa11.96□□□□□ -0.49
PDLIM3-213ENST00000629667 OR5H14A6NHG9 310 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 H7C2Y5 167 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 CRTAPO75718 401 aaPredicted RBP11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 MC5RP33032 325 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 RASSF2P50749 326 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 OR2G6Q5TZ20 316 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 TMPRSS11AQ6ZMR5 421 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 SMIM19Q96E16 107 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 IFI27L2Q9H2X8 130 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 ABRACLQ9P1F3 81 aa11.95□□□□□ -0.5
PDLIM3-213ENST00000629667 PLECQ15149 4684 aaKnown RBP11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 TRAV8-7A0A075B6U6 113 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 C13orf42A0A1B0GVH6 325 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 RAB29O14966 203 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 ST8SIA5O15466 376 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 OGG1O15527 345 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 PDCD6O75340 191 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 GPX5O75715 221 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 BAG2O95816 211 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 CT45A6P0DMU7 189 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 CT45A5P0DMU8 189 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 CT45A7P0DMV0 189 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 Q499Y3 187 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 DMKNQ6E0U4 476 aaPredicted RBP11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 SIGIRRQ6IA17 410 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 ZNF562Q6V9R5 426 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 GLDNQ6ZMI3 551 aaPredicted RBP11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 OR9G4Q8NGQ1 327 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 IL1F10Q8WWZ1 152 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 PYDC1Q8WXC3 89 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 CYYR1Q96J86 154 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 Q96M66 194 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 FGF20Q9NP95 211 aaPredicted RBP11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 METTL1Q9UBP6 276 aaKnown RBP11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 WASHC3Q9Y3C0 194 aa11.94□□□□□ -0.5
PDLIM3-213ENST00000629667 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 ANKRD34BA5PLL1 514 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 H0YJW9 148 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 CIB2O75838 187 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 RBBP9O75884 186 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 CA2P00918 260 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 ETV1P50549 477 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 RPL39P5Q59GN2 51 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 LCN12Q6JVE5 192 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 CBR4Q8N4T8 237 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 GHSRQ92847 366 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 RNF5Q99942 180 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 RETNQ9HD89 108 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 BABAM2Q9NXR7 383 aa11.93□□□□□ -0.5
PDLIM3-213ENST00000629667 A0A0G2JLM5 398 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 A0A1W2PPK0 400 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 SLC22A1O15245 554 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 FSTP19883 344 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 KLF5Q13887 457 aaPredicted RBP11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 HMGN3Q15651 99 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 MOGAT2Q3SYC2 334 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 YIF1BQ5BJH7 314 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 CDH26Q8IXH8 852 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 POC5Q8NA72 575 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 GRPEL2Q8TAA5 225 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 FAM46BQ96A09 425 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 OR14A2Q96R54 314 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 FAM110AQ9BQ89 295 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 SLC23A1Q9UHI7 598 aa11.92□□□□□ -0.5
PDLIM3-213ENST00000629667 LOC100130705A0A1B0GUX0 176 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 H3BUA1 57 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 DCKP27707 260 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 CAPGP40121 348 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 FXYD3Q14802 87 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 PSG5Q15238 335 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 TATDN3Q17R31 274 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 C6orf141Q5SZD1 244 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 IL34Q6ZMJ4 242 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 Q8N402 240 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 OR5T1Q8NG75 326 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 APH1BQ8WW43 257 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 ABHD14BQ96IU4 210 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 THAP7Q9BT49 309 aaPredicted RBP11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 HIPK2Q9H2X6 1198 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 CEPT1Q9Y6K0 416 aa11.91□□□□□ -0.5
PDLIM3-213ENST00000629667 SHISA3A0PJX4 238 aa11.9□□□□□ -0.5
PDLIM3-213ENST00000629667 LALBAP00709 142 aa11.9□□□□□ -0.5
PDLIM3-213ENST00000629667 CPEP16870 476 aa11.9□□□□□ -0.5
PDLIM3-213ENST00000629667 MYL12AP19105 171 aa11.9□□□□□ -0.5
PDLIM3-213ENST00000629667 RPS11P62280 158 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDLIM3-213ENST00000629667 SMN1Q16637 294 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms