RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 ZNF318Q5VUA4 2279 aa2.26□□□□□ -2.05
CNOT1-223ENST00000628857 LOXHD1Q8IVV2 1947 aa2.26□□□□□ -2.05
CNOT1-223ENST00000628857 SBF1O95248 1867 aa2.26□□□□□ -2.05
CNOT1-223ENST00000628857 WDR62O43379 1518 aa2.26□□□□□ -2.05
CNOT1-223ENST00000628857 ZFYVE16Q7Z3T8 1539 aa2.26□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF646O15015 1829 aaPredicted RBP2.26□□□□□ -2.05
CNOT1-223ENST00000628857 HFM1A2PYH4 1435 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CROCCQ5TZA2 2017 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RALGAPA1Q6GYQ0 2036 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CHD4Q14839 1912 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CCDC88AQ3V6T2 1871 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 A0A0U1RQV1 116 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 FAM240AA0A1B0GVK7 77 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 FAM168BA1KXE4 195 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 LYRM9A8MSI8 78 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 H3BMQ9 156 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 H7C1C5 153 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 K7EQS6 105 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 M0R1B8 84 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 SAP18O00422 153 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CCL21O00585 134 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GABRPO00591 440 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 FCN1O00602 326 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 NME4O00746 187 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF207O43670 478 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 TRAF3IP2O43734 574 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CXCL13O43927 109 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 KCNK2O95069 426 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 APOC3P02656 99 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 TTRP02766 147 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GYPCP04921 128 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GKN3PP0CG01 181 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RPL7P18124 248 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RCC1P18754 421 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RAB5AP20339 215 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 SRIP30626 198 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 G6PCP35575 357 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GPR6P46095 362 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GALR1P47211 349 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 ARPP19P56211 112 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 TAS2R20P59543 309 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 LCN6P62502 163 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RPS25P62851 125 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 TNFAIP6P98066 277 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 DEFA5Q01523 94 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RPL18AQ02543 176 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GNA12Q03113 381 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF266Q14584 549 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 HERPUD1Q15011 391 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 PEA15Q15121 130 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CCSMST1Q4G0I0 132 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF684Q5T5D7 378 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 DCAF12Q5T6F0 453 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GLT8D1Q68CQ7 371 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 EIF5AL1Q6IS14 154 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RPL22L1Q6P5R6 122 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 PRSS54Q6PEW0 395 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GOLT1AQ6ZVE7 132 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 PRSS41Q7RTY9 318 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 OOSP2Q86WS3 158 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 PNKDQ8N490 385 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 KRTCAP2Q8N6L1 136 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 OR52E2Q8NGJ4 325 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 OR2T4Q8NH00 348 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 OR1S1Q8NH92 325 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 JOSD2Q8TAC2 188 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 RXFP2Q8WXD0 754 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 DLX4Q92988 240 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 MRPL24Q96A35 216 aaKnown RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CLDN23Q96B33 292 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GPR146Q96CH1 333 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GALNT14Q96FL9 552 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 MS4A4EQ96PG1 132 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 OR52B2Q96RD2 323 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 SORT1Q99523 831 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 MGLLQ99685 303 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF436Q9C0F3 470 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GTSF1LQ9H1H1 148 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 IFI27L2Q9H2X8 130 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 OR51I2Q9H344 312 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 GLIPR2Q9H4G4 154 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 VSIRQ9H7M9 311 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 REEP1Q9H902 201 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 NRN1Q9NPD7 142 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 SLC23A2Q9UGH3 650 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 HS3ST2Q9Y278 367 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 KLF12Q9Y4X4 402 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 ADAMTSL1Q8N6G6 1762 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CITO14578 2027 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 DOCK3Q8IZD9 2030 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 BCL9LQ86UU0 1499 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 MLH3Q9UHC1 1453 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 SIGLEC1Q9BZZ2 1709 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 OVOS2A0A0G2JMS6 1433 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CROCC2H7BZ55 1655 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 CUL7Q14999 1698 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 VWA8A3KMH1 1905 aa2.25□□□□□ -2.05
CNOT1-223ENST00000628857 BRCA1P38398 1863 aaKnown RBP2.24□□□□□ -2.05
CNOT1-223ENST00000628857 COL22A1Q8NFW1 1626 aaPredicted RBP2.24□□□□□ -2.05
CNOT1-223ENST00000628857 MAP2P11137 1827 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms