RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 A0A1W2PPE2 198 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 A0A1W2PR64 198 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 A0A1W2PRV1 198 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 MEX3AA1L020 520 aaKnown RBP6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 FAM25EA8MYX2 175 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 TNFSF12O43508 249 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 FCN3O75636 299 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 SIX6O95475 246 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 IGLV2-14P01704 120 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 RBP4P02753 201 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 SERPINE2P07093 398 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 OMGP23515 440 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 DNASE1P24855 282 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 NFYBP25208 207 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 UCP1P25874 307 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 GPR12P47775 334 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 GZMKP49863 264 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 GNB2P62879 340 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 CATR1Q13166 79 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 SP6Q3SY56 376 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 ESCO2Q56NI9 601 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 PRAMEF5Q5TYX0 476 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 WDR25Q64LD2 544 aaPredicted RBP6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 ZNF695Q8IW36 515 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 DRAM1Q8N682 238 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 C8orf31Q8N9H6 132 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 GLYATL2Q8WU03 294 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 MSI2Q96DH6 328 aaKnown RBP6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 C18orf12Q96KH6 178 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 TMEM56Q96MV1 263 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 TP53RKQ96S44 253 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 HSD17B10Q99714 261 aaKnown RBP6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 AGMATQ9BSE5 352 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 ABHD14AQ9BUJ0 271 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 NMES1Q9C002 83 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 FAM212BQ9NTI7 297 aaPredicted RBP6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 COMMD9Q9P000 198 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 RNF150Q9ULK6 438 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 TMED3Q9Y3Q3 217 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 TMEM56-RWDD3S4R434 201 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 COL12A1Q99715 3063 aa6.21□□□□□ -1.42
PTP4A1-206ENST00000627002 TANC2Q9HCD6 1990 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 CHD3Q12873 2000 aaKnown RBP6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 MYO9AB2RTY4 2548 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 PPIAL4CA0A0B4J2A2 164 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 C17orf98A8MV24 154 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 SMLR1H3BR10 107 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 NDUFS8O00217 210 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 CCSO14618 274 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 RAB29O14966 203 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 NDUFS7O75251 213 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 ADAP1O75689 374 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 ATG12O94817 140 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 CDS2O95674 445 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 IGHV4-39P01824 125 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 LIPFP07098 398 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 HOXB5P09067 269 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 PPIAL4GP0DN37 164 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 PAX1P15863 534 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 RPA2P15927 270 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 CCL3L1P16619 93 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 SSTR2P30874 369 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 DLX6P56179 175 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 EIF4EBP1Q13541 118 aaPredicted RBP6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 DCAF12L2Q5VW00 463 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 TMEM268Q5VZI3 342 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 GGNBP1Q5YKI7 109 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 SLC25A48Q6ZT89 311 aaKnown RBP6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 ZNF525Q8N782 197 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 ZNF439Q8NDP4 499 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 LY6G5BQ8NDX9 201 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 OR51H1Q8NH63 302 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 CD300LFQ8TDQ1 290 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 RBPMSQ93062 196 aaKnown RBP6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 C2orf50Q96LR7 162 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 PIMREGQ9BSJ6 248 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 SSBP3Q9BWW4 388 aaPredicted RBP6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 IFI27L2Q9H2X8 130 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 SDHAF2Q9NX18 166 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 PRR13Q9NZ81 148 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 SESN1Q9Y6P5 492 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 DYSFO75923 2080 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 USP9XQ93008 2570 aaPredicted RBP6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 HIVEP3Q5T1R4 2406 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 CREBBPQ92793 2442 aa6.2□□□□□ -1.42
PTP4A1-206ENST00000627002 SPTAN1Q13813 2472 aaKnown RBP6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 LOC105371242A0A075B767 164 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 A0A087X0M5 115 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 A0A1B0GX30 115 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 M0R1W7 72 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 MMP23AO75900 390 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 IGHV2-5P01817 119 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 PET100P0DJ07 73 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 IGHV1-8P0DP01 117 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 ZNF16P17020 682 aaPredicted RBP6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 VDAC1P21796 283 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 COL8A1P27658 744 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 KIR2DS2P43631 304 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 GNG10P50151 68 aa6.19□□□□□ -1.42
PTP4A1-206ENST00000627002 NKX2-5P52952 324 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms