RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 SDF2L1Q9HCN8 221 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 TMEM9BQ9NQ34 198 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 LIN7CQ9NUP9 197 aaKnown RBP12.84□□□□□ -0.35
LINC00552-201ENST00000625151 DMRT1Q9Y5R6 373 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 IGHV3-64DA0A0J9YX35 117 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 C9orf172C9J069 976 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 CYB5R3P00387 301 aaPredicted RBP12.84□□□□□ -0.35
LINC00552-201ENST00000625151 TRGC1P0CF51 173 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 RND2P52198 227 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 PLGLB1Q02325 96 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 MOB1BQ7L9L4 216 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 C1orf87Q8N0U7 546 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 DRAM1Q8N682 238 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 FRZBQ92765 325 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 GPR61Q9BZJ8 451 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 SPRY4Q9C004 299 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 GP6Q9HCN6 339 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 FOXJ2Q9P0K8 574 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 RNF150Q9ULK6 438 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 CEBPZOSA8MTT3 80 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 CEACAM6P40199 344 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 SERF2P84101 59 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 HNF4GQ14541 408 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 TMEM41BQ5BJD5 291 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 MCEMP1Q8IX19 187 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 HIST3H2BBQ8N257 126 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 SCCPDHQ8NBX0 429 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 OR10D4PQ8NGN7 298 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 RBKSQ9H477 322 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 TMEM242Q9NWH2 141 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 TREM2Q9NZC2 230 aa12.83□□□□□ -0.35
LINC00552-201ENST00000625151 MAP1LC3B2A6NCE7 125 aa12.83□□□□□ -0.36
LINC00552-201ENST00000625151 SEC14L6B5MCN3 397 aa12.83□□□□□ -0.36
LINC00552-201ENST00000625151 CLDN34H7C241 214 aa12.83□□□□□ -0.36
LINC00552-201ENST00000625151 NKX6-1P78426 367 aaPredicted RBP12.83□□□□□ -0.36
LINC00552-201ENST00000625151 MAP1LC3BQ9GZQ8 125 aa12.83□□□□□ -0.36
LINC00552-201ENST00000625151 ZNF292O60281 2723 aa12.83□□□□□ -0.36
LINC00552-201ENST00000625151 IGKV1D-33P01593 117 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 IGKV1-33P01594 117 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 GPX4P36969 197 aaPredicted RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 ERVK11-1P61568 191 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 C9orf152Q5JTZ5 239 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 OR8G2PQ6IF36 304 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 FGFRL1Q8N441 504 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 TAF15Q92804 592 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 P2RX4Q99571 388 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 VAX2Q9UIW0 290 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 A0A1W2PNU3 283 aaPredicted RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 PPP1R2P9O14990 202 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 CELA3BP08861 270 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 RNF224P0DH78 156 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 SLC38A11Q08AI6 406 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 C4orf17Q53FE4 359 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 MRGPRGQ86SM5 289 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 ZNF383Q8NA42 475 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 BCL2L2Q92843 193 aaPredicted RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 ZPBPQ9BS86 351 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 RTL8AQ9BWD3 113 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 MBNL3Q9NUK0 354 aaKnown RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 URB1O60287 2271 aaKnown RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 CUL9Q8IWT3 2517 aa12.82□□□□□ -0.36
LINC00552-201ENST00000625151 PRRC2CQ9Y520 2896 aaKnown RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 ZFHX2Q9C0A1 2572 aaPredicted RBP12.82□□□□□ -0.36
LINC00552-201ENST00000625151 CDIPTO14735 213 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 SPCS3P61009 180 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 ERVS71-1P61550 626 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 TLE1Q04724 770 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 ACSF3Q4G176 576 aaPredicted RBP12.81□□□□□ -0.36
LINC00552-201ENST00000625151 DCAF10Q5QP82 559 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 WDR25Q64LD2 544 aaPredicted RBP12.81□□□□□ -0.36
LINC00552-201ENST00000625151 RPP25LQ8N5L8 163 aaKnown RBP12.81□□□□□ -0.36
LINC00552-201ENST00000625151 STRADBQ9C0K7 418 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 CBY1Q9Y3M2 126 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 PHOX2AO14813 284 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 RAMP3O60896 148 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 SELEP16581 610 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 MDKP21741 143 aaPredicted RBP12.81□□□□□ -0.36
LINC00552-201ENST00000625151 RAB4BP61018 213 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 ALKBH6Q3KRA9 238 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
LINC00552-201ENST00000625151 PARD6GQ9BYG4 376 aaPredicted RBP12.81□□□□□ -0.36
LINC00552-201ENST00000625151 CACNA1DQ01668 2161 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 PCNX2A6NKB5 2137 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 MUC6Q6W4X9 2439 aa12.81□□□□□ -0.36
LINC00552-201ENST00000625151 ZNF737O75373 536 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 CLDN1O95832 211 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 CEBPDP49716 269 aaPredicted RBP12.8□□□□□ -0.36
LINC00552-201ENST00000625151 MEOX1P50221 254 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 CD81P60033 236 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 DEFA6Q01524 100 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 TMEM14EPQ6UXP3 125 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 PINX1Q96BK5 328 aaKnown RBP12.8□□□□□ -0.36
LINC00552-201ENST00000625151 OR2J1Q9GZK6 312 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 ABI3Q9P2A4 366 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 WIPI2Q9Y4P8 454 aa12.8□□□□□ -0.36
LINC00552-201ENST00000625151 HMGB3O15347 200 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms