RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 MMP17Q9ULZ9 603 aa6.42□□□□□ -1.38
TRIM49B-202ENST00000622138 PTRH2Q9Y3E5 179 aaKnown RBP6.42□□□□□ -1.38
TRIM49B-202ENST00000622138 PHF3Q92576 2039 aaKnown RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 TRAV9-2A0A087WT02 112 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 NKX2-6A6NCS4 301 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 C2orf72A6NCS6 295 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 DPRXA6NFQ7 191 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 TMEM150CB9EJG8 249 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ALG1L2C9J202 215 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ZNF878C9JN71 531 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 M0R1X1 148 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 IGHMP01871 453 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 CCNOP22674 350 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 MDH2P40926 338 aaKnown RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 PSMB3P49720 205 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 RAB9AP51151 201 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 DUSP3P51452 185 aaPredicted RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 SERF2P84101 59 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ZNF154Q13106 437 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ZNF726P1Q15940 193 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 OR10J3Q5JRS4 329 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 LCN15Q6UWW0 184 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 C12orf54Q6X4T0 127 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 NEGR1Q7Z3B1 354 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 CCDC71LQ8N9Z2 235 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 C5orf17Q8NAS9 161 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 OR5A2Q8NGI9 324 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 SLC25A40Q8TBP6 338 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 MRPL30Q8TCC3 161 aaKnown RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 RTN4IP1Q8WWV3 396 aaPredicted RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 SARAFQ96BY9 339 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 SPACA9Q96E40 222 aaPredicted RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ST6GALNAC5Q9BVH7 336 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 G3V3Y1 287 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 SOX1O00570 391 aaPredicted RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 TMPRSS2O15393 492 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 MT-ATP6P00846 226 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 CRYGCP07315 174 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 C1QTNF9P0C862 333 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 JMJD7P0C870 316 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ZNF728P0DKX0 622 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 GDF1P27539 372 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 FASLGP48023 281 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 AMTP48728 403 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 CRYBA4P53673 196 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 TMEM267Q0VDI3 215 aaPredicted RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 SLAQ13239 276 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 RNFT1Q5M7Z0 435 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 UFSP1Q6NVU6 142 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 GLIPR1L1Q6UWM5 242 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ASCL4Q6XD76 172 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 OR10P1Q8NGE3 313 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 LMX1AQ8TE12 382 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 OR5P3Q8WZ94 311 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 DAZLQ92904 295 aaKnown RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 KLHDC7BQ96G42 594 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 EAF1Q96JC9 268 aaPredicted RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 C1orf147Q96MC9 270 aaPredicted RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 MRPL18Q9H0U6 180 aaKnown RBP6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 ZNF286AQ9HBT8 521 aa6.41□□□□□ -1.38
TRIM49B-202ENST00000622138 TRAV26-1A0A087WT03 109 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 A0A1W2PPC4 97 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 A0A1W2PQD3 144 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 FOXI3A8MTJ6 420 aaPredicted RBP6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 SHISA8B8ZZ34 492 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 SH2D1BO14796 132 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 SSSCA1O60232 199 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 C3orf79P0CE67 100 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 PGCP20142 388 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 OMGP23515 440 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 NPBWR2P48146 333 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 EIF3IQ13347 325 aaKnown RBP6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 DEFB133Q30KQ1 61 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 BVES-AS1Q5T3Y7 98 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 WDR82Q6UXN9 313 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 ODF3L1Q8IXM7 274 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 ZNF441Q8N8Z8 693 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 OR1L3Q8NH93 324 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 PLPPR1Q8TBJ4 325 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 SPSB1Q96BD6 273 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 ADAT3Q96EY9 351 aaPredicted RBP6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 NEIL1Q96FI4 390 aaPredicted RBP6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 TAAR6Q96RI8 345 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 OR10A2Q9H208 303 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 MED29Q9NX70 200 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 POLR1DQ9Y2S0 133 aa6.4□□□□□ -1.38
TRIM49B-202ENST00000622138 IGHV3-20A0A0C4DH32 117 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 LOC102725191A0A1B0GVB3 256 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 LILRA5A6NI73 299 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 MS4A18H0YCH9 400 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 SLC25A17O43808 307 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 CGAP01215 116 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 IGLV3-19P01714 112 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 AZU1P20160 251 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 GUCA1AP43080 201 aaPredicted RBP6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 CEBPDP49716 269 aaPredicted RBP6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 CKS1BP61024 79 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 ZP4Q12836 540 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 MS4A18Q3C1V0 323 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms