RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 EIF4G3O43432 1585 aaKnown RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 RB1CC1Q8TDY2 1594 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 BORCS7-ASMTA0A0B4J1R7 106 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 A0A0J9YXV3 536 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 GMNCA6NCL1 334 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 G3V2T6 193 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 K7EQS6 105 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 K7N7A8 449 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 COPEO14579 308 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 CYB5BO43169 146 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 ARL6IP5O75915 188 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 CA2P00918 260 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 IGHMP01871 453 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 HBZP02008 142 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 APOA2P02652 100 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 CSF3P09919 207 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 SPI1P17947 270 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 AQP1P29972 269 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 PRSS3P35030 304 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 PHBP35232 272 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 VDAC2P45880 294 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 NDUFA8P51970 172 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 RPS20P60866 119 aaKnown RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 DAD1P61803 113 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 DYNLL1P63167 89 aaKnown RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 ELF3P78545 371 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 FAM201AQ5SY85 155 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 TMEM236Q5W0B7 351 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 CLEC19AQ6UXS0 136 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 TMPPEQ6ZT21 453 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 C20orf196Q8IYI0 205 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 H1FOOQ8IZA3 346 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 ZCCHC24Q8N2G6 241 aaKnown RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 NKAPP1Q8N9T2 125 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 OR11H7Q8NGC8 314 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 OR4M1Q8NGD0 313 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 OR1N2Q8NGR9 330 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 OR8S1Q8NH09 359 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 OR10G6Q8NH81 332 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 GNPDA2Q8TDQ7 276 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 CCL17Q92583 94 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 GALMQ96C23 342 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 TM4SF18Q96CE8 201 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 CAPZA3Q96KX2 299 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 KLF6Q99612 283 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 PRSS27Q9BQR3 290 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 C1orf50Q9BV19 199 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 SFXN3Q9BWM7 321 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 ULBP3Q9BZM4 244 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 DEFB127Q9H1M4 99 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 SRMSQ9H3Y6 488 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 ACER3Q9NUN7 267 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 COA4Q9NYJ1 87 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 SIGLEC7Q9Y286 467 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 BTRCQ9Y297 605 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 PKIGQ9Y2B9 76 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 UGT2A1Q9Y4X1 527 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 HEY1Q9Y5J3 304 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 RFNGQ9Y644 331 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 BCL9O00512 1426 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 FAM135BQ49AJ0 1406 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 NAV1Q8NEY1 1877 aa2.5□□□□□ -2.01
BRCA1-229ENST00000621897 DNMT1P26358 1616 aaKnown RBP2.5□□□□□ -2.01
BRCA1-229ENST00000621897 A0A087WX48 190 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 FAM236DA0A1B0GTK5 79 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 PVALEFA0A1B0GWK0 134 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 A0A1B0GX51 115 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 PLAC8L1A1L4L8 177 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 C5orf49A4QMS7 147 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 TRAPPC13A5PLN9 417 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 K7EPK0 472 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 M0QYV0 167 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 UPK1AO00322 258 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 DEGS1O15121 323 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 TRBV12-3P01733 135 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 CRYBA1P05813 215 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 FAM236CP0DP71 79 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 RAB3AP20336 220 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 FMO3P31513 532 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 CD70P32970 193 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 BTCP35070 178 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 GLRXP35754 106 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 TALDO1P37837 337 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 CD200P41217 278 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 P2RX1P51575 399 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 SLC18A1P54219 525 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 RPS28P62857 69 aaKnown RBP2.49□□□□□ -2.01
BRCA1-229ENST00000621897 HPCAP84074 193 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 EMX2Q04743 252 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 PRDX4Q13162 271 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 FBXL19-AS1Q494R0 122 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 Q499Y3 187 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 ATP6AP1LQ52LC2 224 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 KDM4DQ6B0I6 523 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 VN1R4Q7Z5H5 301 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 FAM24BQ8N5W8 94 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 OR2G3Q8NGZ4 309 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 OR4S2Q8NH73 311 aa2.49□□□□□ -2.01
BRCA1-229ENST00000621897 OR9G1Q8NH87 305 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms