RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PRSS44E7EML9 344 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 CHST1O43916 411 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 IFNA17P01571 189 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 GLAP06280 429 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 RAB14P61106 215 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 RPS23P62266 143 aaKnown RBP8.74□□□□□ -1.01
VPS11-208ENST00000621676 SMCO1Q147U7 214 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 ACTBL2Q562R1 376 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 MBNL2Q5VZF2 373 aaKnown RBP8.74□□□□□ -1.01
VPS11-208ENST00000621676 ST6GALNAC3Q8NDV1 305 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 RABL2BQ9UNT1 228 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 TRAV3A0A0B4J244 114 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 CRYM-AS1A6NIL9 109 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 LRRC30A6NM36 301 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 TNFRSF1AP19438 455 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 MPZP25189 248 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 NUP62P37198 522 aaPredicted RBP8.74□□□□□ -1.01
VPS11-208ENST00000621676 ZNF146Q15072 292 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 LHFPL4Q7Z7J7 247 aa8.74□□□□□ -1.01
VPS11-208ENST00000621676 SMCO3A2RU48 225 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 OOEPA6NGQ2 149 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 K7EPK0 472 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 CTSDP07339 412 aaPredicted RBP8.73□□□□□ -1.01
VPS11-208ENST00000621676 VAMP2P63027 116 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 LCN2P80188 198 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 KLRD1Q13241 179 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 TMEM187Q14656 261 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 FAM71E2Q8N5Q1 922 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 ZNF525Q8N782 197 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 PERPQ96FX8 193 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 CTSZQ9UBR2 303 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 PRH1P02810 166 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 CFPP27918 469 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 APOBEC3AP31941 199 aaPredicted RBP8.73□□□□□ -1.01
VPS11-208ENST00000621676 ZNF616Q08AN1 781 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 DHRS11Q6UWP2 260 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 PCGF1Q9BSM1 259 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 PIGMQ9H3S5 423 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 PRORYQ9H606 182 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 CALYQ9NYX4 217 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 IL36GQ9NZH8 169 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
VPS11-208ENST00000621676 F2RP25116 425 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 TAS2R31P59538 309 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 NCMAPQ5T1S8 102 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 ZBTB37Q5TC79 503 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 LIAT1Q6ZQX7 453 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 LGI3Q8N145 548 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 LILRB1Q8NHL6 650 aaPredicted RBP8.72□□□□□ -1.01
VPS11-208ENST00000621676 C5orf30Q96GV9 206 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 APCP25054 2843 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 TRGV10A0A0A0MS01 117 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 ZNF737O75373 536 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 WNT2P09544 360 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 HOXB1P14653 301 aaPredicted RBP8.72□□□□□ -1.01
VPS11-208ENST00000621676 NKX2-1P43699 371 aaPredicted RBP8.72□□□□□ -1.01
VPS11-208ENST00000621676 RAG2P55895 527 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 SSBP1Q04837 148 aaKnown RBP8.72□□□□□ -1.01
VPS11-208ENST00000621676 ZNF672Q499Z4 452 aaPredicted RBP8.72□□□□□ -1.01
VPS11-208ENST00000621676 Q6ZSR3 168 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 Q8IYB0 196 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 CCDC54Q8NEL0 328 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 GPR146Q96CH1 333 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 C2orf50Q96LR7 162 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 SH3BGRL3Q9H299 93 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 ELOVL5Q9NYP7 299 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 RNF222A6NCQ9 220 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 FCN3O75636 299 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 OR2A4O95047 310 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 NAT1P18440 290 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 RPL12P30050 165 aaKnown RBP8.72□□□□□ -1.01
VPS11-208ENST00000621676 TMEM33P57088 247 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 SMUG1Q53HV7 270 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 SLC38A6Q8IZM9 456 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 OR2A7Q96R45 310 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 SLC2A8Q9NY64 477 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 RCC2Q9P258 522 aaKnown RBP8.72□□□□□ -1.01
VPS11-208ENST00000621676 IL19Q9UHD0 177 aa8.72□□□□□ -1.01
VPS11-208ENST00000621676 TMEM210A6NLX4 147 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 NDUFB3O43676 98 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 LGALS4P56470 323 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 FAM209AQ5JX71 171 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 SPICQ8N5J4 248 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 CCDC71LQ8N9Z2 235 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 OR10X1Q8NGY0 326 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 MSI2Q96DH6 328 aaKnown RBP8.71□□□□□ -1.01
VPS11-208ENST00000621676 ABHD14AQ9BUJ0 271 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 MS4A5Q9H3V2 200 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 SDHAF2Q9NX18 166 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 RABL2AQ9UBK7 228 aaPredicted RBP8.71□□□□□ -1.01
VPS11-208ENST00000621676 FBXO7Q9Y3I1 522 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 S4R3C0 116 aa8.71□□□□□ -1.01
VPS11-208ENST00000621676 TRBV6-7A0A0A0MS04 114 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 CEBPZOSA8MTT3 80 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 IGKV1-16P04430 117 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 TRAPPC2P0DI81 140 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 TRAPPC2BP0DI82 140 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 TBPP20226 339 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 S100GP29377 79 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms