RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 WIPI1Q5MNZ9 446 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-210ENST00000621266 CCL17Q92583 94 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 OR8B2Q96RD0 313 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 SLC26A1Q9H2B4 701 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 TMEM160Q9NX00 188 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 TRAV38-1A0A0B4J264 116 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 SERTM1A2A2V5 107 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 C7orf66A4D0T2 115 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 OR4A8P0C604 315 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 HKR1P10072 659 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 PPP1CAP62136 330 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 OR5A1Q8NGJ0 315 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
COL4A6-210ENST00000621266 IGKV3D-15A0A087WSY6 115 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 A6NNC1 897 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 GDF9O60383 454 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 IGKV3-15P01624 115 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 CD300LDQ6UXZ3 194 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 MAP1LC3AQ9H492 121 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 HILPDAQ9Y5L2 63 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 KLF4O43474 513 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 DNAL4O96015 105 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 GLIPR1P48060 266 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 OR10AG1Q8NH19 301 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 MRGPRX3Q96LB0 322 aa8.63□□□□□ -1.03
COL4A6-210ENST00000621266 MAP1BP46821 2468 aaKnown RBP8.63□□□□□ -1.03
COL4A6-210ENST00000621266 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 CGB1A6NKQ9 187 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 PLPP3O14495 311 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-210ENST00000621266 OR4D5Q8NGN0 318 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 NINQ8N4C6 2090 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 SP9P0CG40 484 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 RND3P61587 244 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 TMEM91Q6ZNR0 172 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 Q8WTZ3 238 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 CITED1Q99966 193 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 UBE2L6O14933 153 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 ERGP11308 486 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 PPP1CCP36873 323 aaKnown RBP8.62□□□□□ -1.03
COL4A6-210ENST00000621266 MEF2CQ06413 473 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-210ENST00000621266 MEIG1Q5JSS6 88 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 SFRP2Q96HF1 295 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 SIGMAR1Q99720 223 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 GHITMQ9H3K2 345 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 IGLV3-16A0A075B6K0 115 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 H3BUT2 72 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 PPP1R17O96001 155 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 LGALS7P47929 136 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 HMGA2P52926 109 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 HIGD1AQ9Y241 93 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 PLAUP00749 431 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 TNFRSF1AP19438 455 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 FAM53AQ6NSI3 398 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-210ENST00000621266 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
COL4A6-210ENST00000621266 CBLN1P23435 193 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 SUMO3P55854 103 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-210ENST00000621266 OR11G2Q8NGC1 345 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 SLC25A30Q5SVS4 291 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF324BQ6AW86 544 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-210ENST00000621266 OR5R1Q8NH85 324 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 GNRHR2Q96P88 292 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 NHLRC3Q5JS37 347 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 LDLRAD2Q5SZI1 272 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF793Q6ZN11 406 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 MRAP2Q96G30 205 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 HSPB7Q9UBY9 170 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 OR51B2Q9Y5P1 312 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 IGKV3D-11A0A0A0MRZ8 115 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 IGKV3-11P04433 115 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 FBLN7Q53RD9 439 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 DEGS2Q6QHC5 323 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 HMGCLL1Q8TB92 370 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 RABAC1Q9UI14 185 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 AMMECR1Q9Y4X0 333 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-210ENST00000621266 TRGV5A0A0B4J1U4 118 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 HPRT1P00492 218 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 MESTQ5EB52 335 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 SLC25A40Q8TBP6 338 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 KCNS1Q96KK3 526 aa8.61□□□□□ -1.03
COL4A6-210ENST00000621266 ALX4Q9H161 411 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-210ENST00000621266 CISD1Q9NZ45 108 aaKnown RBP8.61□□□□□ -1.03
COL4A6-210ENST00000621266 SSTR5P35346 364 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 SERF2P84101 59 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TNFRSF9Q07011 255 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 SPINK14Q6IE38 97 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 ASB10Q8WXI3 467 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 ZNF729A6NN14 1252 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 PPIHO43447 177 aaKnown RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 DLX6P56179 175 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 SOX8P57073 446 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 TNFAIP6P98066 277 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-210ENST00000621266 APCDD1LQ8NCL9 501 aa8.6□□□□□ -1.03
COL4A6-210ENST00000621266 OR4D11Q8NGI4 311 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms