RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 C6orf201Q7Z4U5 140 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 ANKRD10Q9NXR5 420 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 CHST1O43916 411 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 OR5C1Q8NGR4 320 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 LRRC29Q8WV35 223 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 CNTD2Q9H8S5 307 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 MBNL1Q9NR56 388 aaKnown RBP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 RALYQ9UKM9 306 aaKnown RBP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 CTXND1A0A1B0GTU2 59 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 H0Y8G0 127 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 J3QR06 171 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 RBFOX2O43251 390 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 EDN3P14138 238 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 NPPCP23582 126 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 TNXAQ16473 311 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 C12orf73Q69YU5 71 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 CLDND2Q8NHS1 167 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 ZPLD1Q8TCW7 415 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 C7orf72A4D263 438 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 FSTP19883 344 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 SPEM2Q0P670 501 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 KIAA0141Q14154 515 aaPredicted RBP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 MRM1Q6IN84 353 aaKnown RBP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 VWA1Q6PCB0 445 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 TMEM235A6NFC5 223 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 OPN1LWP04000 364 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 HOXC5Q00444 222 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 SRSF2Q01130 221 aaKnown RBP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 ATP5G2Q06055 141 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 SQSTM1Q13501 440 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 ZNF511Q8NB15 262 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 OR51M1Q9H341 326 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 V9GYH0 126 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 CACNA1HO95180 2353 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 CSRP1P21291 193 aaKnown RBP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 SRSF7Q16629 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 MRM2Q9UI43 246 aaKnown RBP6.3□□□□□ -1.4
CSMD2-210ENST00000619121 IGHV1-45A0A0A0MS14 117 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 CEACAM18A8MTB9 384 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 FZD5Q13467 585 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 SEC22AQ96IW7 307 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 ZMIZ1Q9ULJ6 1067 aa6.3□□□□□ -1.4
CSMD2-210ENST00000619121 ADAMTS9Q9P2N4 1935 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 A0A1W2PNR3 127 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 RPS27LQ71UM5 84 aaKnown RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 DEFB124Q8NES8 71 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 OR8G5Q8NG78 346 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 FAM206AQ9NX38 181 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 NDUFS8O00217 210 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 EIF4EBP2Q13542 120 aaPredicted RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 VGLL1Q99990 258 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 CA6P23280 308 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 MRPS18AQ9NVS2 196 aaKnown RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 ATP5LO75964 103 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 ALX3O95076 343 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 SLC37A1P57057 533 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 RPS4XP62701 263 aaKnown RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 MED20Q9H944 212 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 FRS3O43559 492 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 PRSS1P07477 247 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 TGFBR1P36897 503 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 OR9G1Q8NH87 305 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 GEMIN7Q9H840 131 aaKnown RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 TMEM11P17152 192 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 KLF9Q13886 244 aaPredicted RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 FAM71F2Q6NXP2 309 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 NME2P22392 152 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 OSR1Q8TAX0 266 aaPredicted RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 FAM168AQ92567 244 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 NEURL2Q9BR09 285 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 SLC6A13Q9NSD5 602 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 LMX1BO60663 402 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 VPS25Q9BRG1 176 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 USF3Q68DE3 2245 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 OR3A4PP47883 348 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 C3orf36Q3SXR2 165 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 RSG1Q9BU20 258 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 A0A096LPE4 126 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 A0A1W2PPZ6 126 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 RPL36A-HNRNPH2H7BZ11 118 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 PPYP01298 95 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 LOXL3P58215 753 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 OR5AU1Q8NGC0 362 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 QTRT1Q9BXR0 403 aaKnown RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 SNURFLB1AK76 121 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 WDFY1Q8IWB7 410 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 MYEOVQ96EZ4 313 aa6.29□□□□□ -1.4
CSMD2-210ENST00000619121 MCRIP2Q9BUT9 160 aaKnown RBP6.29□□□□□ -1.4
CSMD2-210ENST00000619121 SMIM30A4D0T7 59 aa6.28□□□□□ -1.4
CSMD2-210ENST00000619121 MELTFP08582 738 aa6.28□□□□□ -1.4
CSMD2-210ENST00000619121 ZNF750Q32MQ0 723 aa6.28□□□□□ -1.4
CSMD2-210ENST00000619121 SH2D5Q6ZV89 423 aa6.28□□□□□ -1.4
CSMD2-210ENST00000619121 OR5H6Q8NGV6 325 aa6.28□□□□□ -1.4
CSMD2-210ENST00000619121 FITM1A5D6W6 292 aa6.28□□□□□ -1.4
CSMD2-210ENST00000619121 CENPVQ7Z7K6 275 aaPredicted RBP6.28□□□□□ -1.4
CSMD2-210ENST00000619121 ATG4DQ86TL0 474 aaPredicted RBP6.28□□□□□ -1.4
CSMD2-210ENST00000619121 RNASE6Q93091 150 aaKnown RBP6.28□□□□□ -1.4
CSMD2-210ENST00000619121 RSRP1Q9BUV0 290 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms