RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CENPVQ7Z7K6 275 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-228ENST00000618469 OR4X2Q8NGF9 303 aa12.67□□□□□ -0.38
BRCA1-228ENST00000618469 EDARADDQ8WWZ3 215 aa12.67□□□□□ -0.38
BRCA1-228ENST00000618469 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
BRCA1-228ENST00000618469 IGKV1-6A0A0C4DH72 117 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 TRDCB7Z8K6 153 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 FABP7O15540 132 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 CEACAM6P40199 344 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 RPL39P5Q59GN2 51 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 C10orf99Q6UWK7 81 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 SLC35E3Q7Z769 313 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 NDUFA11Q86Y39 141 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 Q8N9W7 124 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 ABHD14BQ96IU4 210 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 LIN7CQ9NUP9 197 aaKnown RBP12.66□□□□□ -0.38
BRCA1-228ENST00000618469 PIPOXQ9P0Z9 390 aa12.66□□□□□ -0.38
BRCA1-228ENST00000618469 A0A1W2PRX2 142 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 RAB29O14966 203 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 BET1O15155 118 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 TGFBR1P36897 503 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 TALDO1P37837 337 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 ARL6IP1Q15041 203 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 MMDQ15546 238 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 IDNKQ5T6J7 187 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 FAM131AQ6UXB0 335 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 OR8H1Q8NGG4 311 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 OR4A4PQ8NGN8 299 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 YIPF6Q96EC8 236 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 NOL4LQ96MY1 436 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-228ENST00000618469 S1PR3Q99500 378 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 C11orf54Q9H0W9 315 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-228ENST00000618469 RHBDL2Q9NX52 303 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 RDH8Q9NYR8 311 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 ZNF230Q9UIE0 474 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-228ENST00000618469 LINC00527Q9UJ94 153 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-228ENST00000618469 PLXNB1O43157 2135 aa12.65□□□□□ -0.38
BRCA1-228ENST00000618469 PSMB11A5LHX3 300 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 AIREO43918 545 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 SCGNO76038 276 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 F2RL1P55085 397 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
BRCA1-228ENST00000618469 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 IGSF11Q5DX21 431 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 FAM71E2Q8N5Q1 922 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 OR5H6Q8NGV6 325 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 RASL11BQ9BPW5 248 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 ZNF251Q9BRH9 671 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 CABLES2Q9BTV7 478 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
BRCA1-228ENST00000618469 TMEM235A6NFC5 223 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 IGHG2P01859 326 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 OPN1MWP04001 364 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 GSTT2P0CG29 244 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 GSTT2BP0CG30 244 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 OPN1MW2P0DN77 364 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 OPN1MW3P0DN78 364 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 GPR12P47775 334 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 SERPINB10P48595 397 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 ACTBP60709 375 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 CD83Q01151 205 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 CDNFQ49AH0 187 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 TCTEX1D4Q5JR98 221 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 GLDNQ6ZMI3 551 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-228ENST00000618469 ZNF329Q86UD4 541 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 CHPT1Q8WUD6 406 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 NUDCD2Q8WVJ2 157 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 R3HDM4Q96D70 268 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 SLC25A38Q96DW6 304 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 AGMATQ9BSE5 352 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 ABCG5Q9H222 651 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
BRCA1-228ENST00000618469 RNF150Q9ULK6 438 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 ETV7Q9Y603 341 aa12.63□□□□□ -0.39
BRCA1-228ENST00000618469 KMT2CQ8NEZ4 4911 aaKnown RBP12.63□□□□□ -0.39
BRCA1-228ENST00000618469 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 CNTFRP26992 372 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 SCAND1P57086 179 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 GNG2P59768 71 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 STPG2Q8N412 459 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 OR4F17Q8NGA8 305 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 OR10J5Q8NHC4 309 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 PHF21AQ96BD5 680 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 OR4F4Q96R69 305 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 HSPB9Q9BQS6 159 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 GINS4Q9BRT9 223 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 ZNF221Q9UK13 617 aa12.62□□□□□ -0.39
BRCA1-228ENST00000618469 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 TRBV6-7A0A0A0MS04 114 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 OR5H14A6NHG9 310 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 TRIM64CA6NLI5 447 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 LINC01548A6NM66 108 aa12.61□□□□□ -0.39
BRCA1-228ENST00000618469 AP4M1O00189 453 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms