RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 MSX1P28360 303 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 HINT1P49773 126 aaPredicted RBP11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 ARF1P84077 181 aaKnown RBP11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 MCEMP1Q8IX19 187 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 RPP25LQ8N5L8 163 aaKnown RBP11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 SIGLEC12Q96PQ1 595 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 TMEM106BQ9NUM4 274 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 HEATR1Q9H583 2144 aaKnown RBP11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 CCL4P13236 92 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 NTF4P34130 210 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 MPLP40238 635 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 PPP1CBP62140 327 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 Q6ZN92 141 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 DECR2Q9NUI1 292 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 CHCHD2Q9Y6H1 151 aaPredicted RBP11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 SPINK9Q5DT21 86 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 ACTL10Q5JWF8 245 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 OR1F12Q8NHA8 337 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 HLA-CQ95604 372 aa11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 C19orf25Q9UFG5 118 aaPredicted RBP11.44□□□□□ -0.58
PCDHA11-202ENST00000616325 BOD1L1Q8NFC6 3051 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 PDCD6O75340 191 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 C1QTNF9P0C862 333 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 Q6ZRM9 215 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 CISD2Q8N5K1 135 aaKnown RBP11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 ST6GALNAC3Q8NDV1 305 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 C22orf15Q8WYQ4 148 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 TAAR3PQ9P1P4 343 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 USF3Q68DE3 2245 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 ADMP35318 185 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 TPPP2P59282 170 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 HBG1P69891 147 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 HBG2P69892 147 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 SPATA46Q5T0L3 261 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 Q6ZWC4 215 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 VPS25Q9BRG1 176 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 DERL1Q9BUN8 251 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 TCFL5Q9UL49 500 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 RNF150Q9ULK6 438 aa11.43□□□□□ -0.58
PCDHA11-202ENST00000616325 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 SIRPB1O00241 398 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 SYNGR2O43760 224 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 IGKV1D-33P01593 117 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 IGKV1-33P01594 117 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 OR5G3P0C626 314 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 PMCHP20382 165 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 BCL3P20749 454 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 S100GP29377 79 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 PSG4Q00888 419 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 RAB30Q15771 203 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 LPAL2Q16609 132 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 NUFIP2Q7Z417 695 aaKnown RBP11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 OR56B2PQ8NGI1 322 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 NABP1Q96AH0 204 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 DCHS1Q96JQ0 3298 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 SPTBN2O15020 2390 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 KIR2DL5BA0A0G2JN68 375 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 KIR2DL5BA0A0G2JPC4 375 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 SERF1AO75920 110 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 NDUFB4O95168 129 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 CRISP2P16562 243 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 CCL1P22362 96 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 CEACAM8P31997 349 aaPredicted RBP11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 KIR2DL5AQ8N109 375 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 CADM4Q8NFZ8 388 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 OR10G4Q8NGN3 311 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 OR10G9Q8NGN4 311 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 OR10G7Q8NGN6 311 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 DNASE2BQ8WZ79 361 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 P2RX4Q99571 388 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 WNT10AQ9GZT5 417 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 IGHV5-10-1A0A0J9YXX1 117 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 A0A0U1RQV5 110 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 C5orf49A4QMS7 147 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 SLC22A20A6NK97 555 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 WDR1O75083 606 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 SLC35B1P78383 322 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 ZNF90Q03938 601 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 STPG4Q8N801 248 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 OR5AU1Q8NGC0 362 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 SLC35E1Q96K37 410 aa11.42□□□□□ -0.58
PCDHA11-202ENST00000616325 KIAA1324LA8MWY0 1029 aaPredicted RBP11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 C11orf94C9JXX5 98 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 RFPL3SP0C7P2 107 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 NTF3P20783 257 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 ANKRD39Q53RE8 183 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 Q6ZPA2 131 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 RABEPKQ7Z6M1 372 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 RPS19BP1Q86WX3 136 aaKnown RBP11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 C17orf82Q86X59 251 aaPredicted RBP11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 SSC4DQ8WTU2 575 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 FOXB1Q99853 325 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 CLEC18AA5D8T8 446 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 NPIPB13A6NJU9 1138 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms