RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 VENTXO95231 258 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 MT-ND6P03923 174 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 CLEC3BP05452 202 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 RABIFP47224 123 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 ZNF324BQ6AW86 544 aaPredicted RBP11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 C8orf44Q96CB5 159 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 HS3ST3A1Q9Y663 406 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 A0A0C4DFX4 3053 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 C7orf71A4D174 169 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 IGLC2P0DOY2 106 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 IGLC3P0DOY3 106 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 ATP5G3P48201 142 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 CKS1BP61024 79 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 TMEM52BQ4KMG9 183 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 RNF144BQ7Z419 303 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 C12orf76Q8N812 135 aaPredicted RBP11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 NT5CQ8TCD5 201 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 SEPSECSQ9HD40 501 aaKnown RBP11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 CUTCQ9NTM9 273 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 HSPB8Q9UJY1 196 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 TRAV9-2A0A087WT02 112 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 IGHV1-69-2A0A0G2JMI3 117 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 C17orf51A8MQB3 221 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 H0Y8X5 98 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 NAPSAO96009 420 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 GPR146Q96CH1 333 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 INSL6Q9Y581 213 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 CEP290O15078 2479 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 RP1L1Q8IWN7 2480 aaPredicted RBP11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 HELZP42694 1942 aaKnown RBP11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 C3orf79P0CE67 100 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 DEFA4P12838 97 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 LHFPL2Q6ZUX7 228 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 LHFPL1Q86WI0 220 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 CD207Q9UJ71 328 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 FBXL7Q9UJT9 491 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 SPCS1Q9Y6A9 102 aa11.69□□□□□ -0.54
PPP4R3B-205ENST00000616288 IGHV3-20A0A0C4DH32 117 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 MUC21A0A0G2JKD1 596 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 MUC21A0A140T8X8 626 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 HELTA6NFD8 242 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 RBFOX2O43251 390 aaKnown RBP eCLIP11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 LEPROTL1O95214 131 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 GFRA1P56159 465 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 RSPO4Q2I0M5 234 aaPredicted RBP11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 MUC21Q5SSG8 566 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 ABCA7Q8IZY2 2146 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 SHANK1Q9Y566 2161 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 MANSC4A6NHS7 340 aaPredicted RBP11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 IL11P20809 199 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 GPR3P46089 330 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 HES3Q5TGS1 186 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 PRAMEF5Q5TYX0 476 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 PRAMEF6Q5VXH4 476 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 KCNS1Q96KK3 526 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 CYR61O00622 381 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 NUPR1O60356 82 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 CA3P07451 260 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 CA7P43166 264 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 C17orf67Q0P5P2 114 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 C16orf54Q6UWD8 224 aa11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
PPP4R3B-205ENST00000616288 PIAS2O75928 621 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 SPPL3Q8TCT6 385 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 FAM206AQ9NX38 181 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 CORTO00230 105 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 CEACAM5P06731 702 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 ZNF137PP52743 207 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 PAX2Q02962 417 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 EGR4Q05215 589 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 SPSB1Q96BD6 273 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 PXMP4Q9Y6I8 212 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 MDC1Q14676 2089 aaKnown RBP11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 HLA-DQA1P01909 254 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 COX19Q49B96 90 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 FA2HQ7L5A8 372 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 TMEM70Q9BUB7 260 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 ARHGAP21Q5T5U3 1957 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 HOXB2P14652 356 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 NMUP48645 174 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 ZDHHC23Q8IYP9 409 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 OR4P4Q8NGL7 312 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 BAHD1Q8TBE0 780 aaPredicted RBP11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 ZNF703Q9H7S9 590 aaPredicted RBP11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 TMEM74BQ9NUR3 256 aa11.67□□□□□ -0.54
PPP4R3B-205ENST00000616288 CA6P23280 308 aa11.66□□□□□ -0.54
PPP4R3B-205ENST00000616288 ZNF788Q6ZQV5 615 aa11.66□□□□□ -0.54
PPP4R3B-205ENST00000616288 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
PPP4R3B-205ENST00000616288 SAP30O75446 220 aa11.66□□□□□ -0.54
PPP4R3B-205ENST00000616288 SCTP09683 121 aa11.66□□□□□ -0.54
PPP4R3B-205ENST00000616288 PLP2Q04941 152 aa11.66□□□□□ -0.54
PPP4R3B-205ENST00000616288 DOLPP1Q86YN1 238 aa11.66□□□□□ -0.54
PPP4R3B-205ENST00000616288 OR4S2Q8NH73 311 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms