RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 MED21Q13503 144 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 FAM131AQ6UXB0 335 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 ODF3L1Q8IXM7 274 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 RHOXF1Q8NHV9 184 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 RDH12Q96NR8 316 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 CLCC1Q96S66 551 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 RNF5Q99942 180 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 BANF2Q9H503 90 aa12.13□□□□□ -0.47
HDDC2-210ENST00000609574 MBNL3Q9NUK0 354 aaKnown RBP12.13□□□□□ -0.47
HDDC2-210ENST00000609574 SLC22A1O15245 554 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 SLC25A17O43808 307 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 SC5DO75845 299 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 MGMTP16455 207 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 NDPQ00604 133 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 LCN12Q6JVE5 192 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 ZNF562Q6V9R5 426 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 IL1F10Q8WWZ1 152 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 NEDD4LQ96PU5 975 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
HDDC2-210ENST00000609574 MRPS18AQ9NVS2 196 aaKnown RBP12.12□□□□□ -0.47
HDDC2-210ENST00000609574 BABAM2Q9NXR7 383 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 METTL1Q9UBP6 276 aaKnown RBP12.12□□□□□ -0.47
HDDC2-210ENST00000609574 WASHC3Q9Y3C0 194 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
HDDC2-210ENST00000609574 STARD9Q9P2P6 4700 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 FCN1O00602 326 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 PDCD6O75340 191 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 IGFBP3P17936 291 aaPredicted RBP12.11□□□□□ -0.47
HDDC2-210ENST00000609574 MYL12AP19105 171 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 DCKP27707 260 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 Q499Y3 187 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 YIF1BQ5BJH7 314 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 OR9G4Q8NGQ1 327 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 GHSRQ92847 366 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 SMIM19Q96E16 107 aa12.11□□□□□ -0.47
HDDC2-210ENST00000609574 FAM103A1Q9BTL3 118 aaKnown RBP12.11□□□□□ -0.47
HDDC2-210ENST00000609574 ANKRD34BA5PLL1 514 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 H3BUA1 57 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 CNIH1O95406 144 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 BAG2O95816 211 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 EGR2P11161 476 aaPredicted RBP12.1□□□□□ -0.47
HDDC2-210ENST00000609574 CPEP16870 476 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 GABRB1P18505 474 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 CAPGP40121 348 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 Q8N402 240 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
HDDC2-210ENST00000609574 ORAI1Q96D31 301 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 CHMP1AQ9HD42 196 aaPredicted RBP12.1□□□□□ -0.47
HDDC2-210ENST00000609574 FGF20Q9NP95 211 aaPredicted RBP12.1□□□□□ -0.47
HDDC2-210ENST00000609574 GHRLQ9UBU3 117 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 SLC23A1Q9UHI7 598 aa12.1□□□□□ -0.47
HDDC2-210ENST00000609574 ST8SIA5O15466 376 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 OGG1O15527 345 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 CT45A6P0DMU7 189 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 CT45A5P0DMU8 189 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 CT45A7P0DMV0 189 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 AADACP22760 399 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
HDDC2-210ENST00000609574 KLF5Q13887 457 aaPredicted RBP12.09□□□□□ -0.47
HDDC2-210ENST00000609574 FXYD3Q14802 87 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 DMKNQ6E0U4 476 aaPredicted RBP12.09□□□□□ -0.47
HDDC2-210ENST00000609574 CBR4Q8N4T8 237 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 POC5Q8NA72 575 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 SETD6Q8TBK2 473 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 PYDC1Q8WXC3 89 aa12.09□□□□□ -0.47
HDDC2-210ENST00000609574 LOC100130705A0A1B0GUX0 176 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 SHISA3A0PJX4 238 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 H0YJW9 148 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 TPPPO94811 219 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 CA2P00918 260 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 LGALS7P47929 136 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 ETV1P50549 477 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 SYNJ2BPP57105 145 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 RPL39P5Q59GN2 51 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 GLDNQ6ZMI3 551 aaPredicted RBP12.08□□□□□ -0.48
HDDC2-210ENST00000609574 C10orf67Q8IYJ2 551 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 OR5T1Q8NG75 326 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 EDARADDQ8WWZ3 215 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 Q96M66 194 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 TMEM68Q96MH6 324 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 C9orf16Q9BUW7 83 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 IFI27L2Q9H2X8 130 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 PEMTQ9UBM1 199 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 GAB2Q9UQC2 676 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 CEPT1Q9Y6K0 416 aa12.08□□□□□ -0.48
HDDC2-210ENST00000609574 TRAV8-7A0A075B6U6 113 aa12.07□□□□□ -0.48
HDDC2-210ENST00000609574 A0A0B4J203 849 aa12.07□□□□□ -0.48
HDDC2-210ENST00000609574 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
HDDC2-210ENST00000609574 A0A1W2PPK0 400 aa12.07□□□□□ -0.48
HDDC2-210ENST00000609574 SPDEFO95238 335 aa12.07□□□□□ -0.48
HDDC2-210ENST00000609574 FSTP19883 344 aa12.07□□□□□ -0.48
HDDC2-210ENST00000609574 PSG5Q15238 335 aa12.07□□□□□ -0.48
HDDC2-210ENST00000609574 RPEL1Q2QD12 228 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms