RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 FLVCR2Q9UPI3 526 aa9.37□□□□□ -0.91
LINC00539-204ENST00000608957 MMP24Q9Y5R2 645 aa9.37□□□□□ -0.91
LINC00539-204ENST00000608957 TRAV39A0A0B4J263 110 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 A0A0B4J293 547 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 ODAMA1E959 279 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 FUOMA2VDF0 154 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 NDUFA7O95182 113 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 SCTP09683 121 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 CTXN2P0C2S0 81 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 ECI1P42126 302 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 GLIPR1P48060 266 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 MECP2P51608 486 aaKnown RBP9.36□□□□□ -0.91
LINC00539-204ENST00000608957 P2RX3P56373 397 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 RAB25P57735 213 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 HERPUD1Q15011 391 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 C6orf183Q5T699 404 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 OR6F1Q8NGZ6 308 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 GIMAP1Q8WWP7 306 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 MRGPRFQ96AM1 343 aa9.36□□□□□ -0.91
LINC00539-204ENST00000608957 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 C17orf98A8MV24 154 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 NPIPB11E5RHQ5 1161 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 RLN1P04808 185 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 FBP1P09467 338 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 ERP29P30040 261 aaKnown RBP9.35□□□□□ -0.91
LINC00539-204ENST00000608957 BCAP31P51572 246 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 EDDM3BP56851 147 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 IGSF11Q5DX21 431 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 AADACL3Q5VUY0 350 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 NCR3LG1Q68D85 454 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 ZNF660Q6AZW8 331 aaPredicted RBP9.35□□□□□ -0.91
LINC00539-204ENST00000608957 SHISA2Q6UWI4 295 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 ZNF554Q86TJ5 538 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 TPRX1Q8N7U7 411 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 OR13A1Q8NGR1 328 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 TERB2Q8NHR7 220 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 MRGPRDQ8TDS7 321 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 KIRREL1Q96J84 757 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 ZNF2Q9BSG1 426 aaPredicted RBP9.35□□□□□ -0.91
LINC00539-204ENST00000608957 FXYD6Q9H0Q3 95 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 NCOR1P1Q9H4R4 102 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 TAF9BQ9HBM6 251 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 KCNIP1Q9NZI2 227 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 VSIG4Q9Y279 399 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 ALG5Q9Y673 324 aa9.35□□□□□ -0.91
LINC00539-204ENST00000608957 IGKV1-6A0A0C4DH72 117 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 C7orf66A4D0T2 115 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 C12orf77C9JDV5 145 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 BET1O15155 118 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 PRAF2O60831 178 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 DIRAS3O95661 229 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
LINC00539-204ENST00000608957 FCGR2CP31995 323 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 HERV-K104P61576 105 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 SURF2Q15527 256 aaPredicted RBP9.34□□□□□ -0.91
LINC00539-204ENST00000608957 LDLRAD2Q5SZI1 272 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 Q6ZSV7 163 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 C5orf24Q7Z6I8 188 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 TMED4Q7Z7H5 227 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 LHFPL4Q7Z7J7 247 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 CADM3Q8N126 398 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 DYNAPQ8N1N2 210 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 PRR18Q8N4B5 295 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 BEND2Q8NDZ0 799 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 SGMS2Q8NHU3 365 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 MARCH1Q8TCQ1 289 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 IL1F10Q8WWZ1 152 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 BEX1Q9HBH7 125 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 OR6C3Q9NZP0 311 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 FAM96BQ9Y3D0 163 aa9.34□□□□□ -0.91
LINC00539-204ENST00000608957 TRBV6-7A0A0A0MS04 114 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 PPYP01298 95 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 IL5P05113 134 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 CRYBA1P05813 215 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 PGAM2P15259 253 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 AADACP22760 399 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 NFYAP23511 347 aaPredicted RBP9.33□□□□□ -0.92
LINC00539-204ENST00000608957 COX7A1P24310 79 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 SSTR5P35346 364 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 FXYD4P59646 89 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 MIDNQ504T8 468 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 OR4F5Q8NH21 305 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 OR1L1Q8NH94 360 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 OR10J5Q8NHC4 309 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 LINC01006Q8NI28 216 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 MOB3AQ96BX8 217 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 MEGF9Q9H1U4 602 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 VPREB3Q9UKI3 123 aa9.33□□□□□ -0.92
LINC00539-204ENST00000608957 CLPSL1A2RUU4 121 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 FAM172BPA6NC97 362 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 ODF3BA8MYP8 253 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 C15orf65H3BRN8 121 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 H3BUX3 64 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 SPINT2O43291 252 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms