RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 TFAP2AP05549 437 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 GLAP06280 429 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 LIMS3P0CW19 117 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 LIMS4P0CW20 117 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 CT45A6P0DMU7 189 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 CT45A5P0DMU8 189 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 CT45A7P0DMV0 189 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 FUT3P21217 361 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 CCDC58Q4VC31 144 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 ZNF562Q6V9R5 426 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 GLDNQ6ZMI3 551 aaPredicted RBP12.76□□□□□ -0.37
USE1-208ENST00000600970 LINC00322Q6ZN03 302 aaPredicted RBP12.76□□□□□ -0.37
USE1-208ENST00000600970 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 OR13C5Q8NGS8 318 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 GALMQ96C23 342 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
USE1-208ENST00000600970 MRPS18AQ9NVS2 196 aaKnown RBP12.76□□□□□ -0.37
USE1-208ENST00000600970 ANKRD34BA5PLL1 514 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 OR5H14A6NHG9 310 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 H0YJW9 148 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 EI24O14681 340 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 ST8SIA5O15466 376 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 GPX5O75715 221 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 GSTP1P09211 210 aaKnown RBP12.75□□□□□ -0.37
USE1-208ENST00000600970 TNCP24821 2201 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 RPL39P5Q59GN2 51 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 C1orf146Q5VVC0 180 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 DMKNQ6E0U4 476 aaPredicted RBP12.75□□□□□ -0.37
USE1-208ENST00000600970 FRAS1Q86XX4 4008 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 ZNF355PQ9NSJ1 428 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 PIPOXQ9P0Z9 390 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 METTL1Q9UBP6 276 aaKnown RBP12.75□□□□□ -0.37
USE1-208ENST00000600970 CEPT1Q9Y6K0 416 aa12.75□□□□□ -0.37
USE1-208ENST00000600970 TRAV8-7A0A075B6U6 113 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 C13orf42A0A1B0GVH6 325 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 IZUMO1RA6ND01 250 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 CA2P00918 260 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 MGMTP16455 207 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 MC5RP33032 325 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 SYNJ2BPP57105 145 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 AWAT2Q6E213 333 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 LCN12Q6JVE5 192 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 JAGN1Q8N5M9 183 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 RHOXF1Q8NHV9 184 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 Q96M66 194 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 Q96MT0 163 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 OR14A2Q96R54 314 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 WASHC3Q9Y3C0 194 aa12.74□□□□□ -0.37
USE1-208ENST00000600970 TRBV5-5A0A0J9YX44 114 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 SHISA3A0PJX4 238 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 H7C2Y5 167 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 RAB29O14966 203 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 OGG1O15527 345 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 RBBP9O75884 186 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 BAG2O95816 211 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 CSN3P07498 182 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 PSG5Q15238 335 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 HMGN3Q15651 99 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 MOGAT2Q3SYC2 334 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 C6orf141Q5SZD1 244 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 OR2G6Q5TZ20 316 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 Q8N402 240 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 POC5Q8NA72 575 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 SMIM19Q96E16 107 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 RNF5Q99942 180 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 PLEKHA3Q9HB20 300 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 SIGLEC8Q9NYZ4 499 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 ADAM30Q9UKF2 790 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 LRRC42Q9Y546 428 aa12.73□□□□□ -0.37
USE1-208ENST00000600970 A0A0G2JLM5 398 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 H3BUA1 57 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 SLC22A1O15245 554 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 PDCD6O75340 191 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 CRTAPO75718 401 aaPredicted RBP12.72□□□□□ -0.37
USE1-208ENST00000600970 ETV1P50549 477 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 ALDH3A2P51648 485 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 RNLSQ5VYX0 342 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 OR5T1Q8NG75 326 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 OR5AN1Q8NGI8 311 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 IL1F10Q8WWZ1 152 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 LINC00476Q8WZB0 136 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 ABHD14BQ96IU4 210 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 FGF20Q9NP95 211 aaPredicted RBP12.72□□□□□ -0.37
USE1-208ENST00000600970 CKLFQ9UBR5 152 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 STEAP1Q9UHE8 339 aa12.72□□□□□ -0.37
USE1-208ENST00000600970 RPL36Q9Y3U8 105 aaKnown RBP12.72□□□□□ -0.37
USE1-208ENST00000600970 FSTP19883 344 aa12.71□□□□□ -0.37
USE1-208ENST00000600970 MECP2P51608 486 aaKnown RBP12.71□□□□□ -0.37
USE1-208ENST00000600970 RPS11P62280 158 aaKnown RBP eCLIP12.71□□□□□ -0.37
USE1-208ENST00000600970 FXYD3Q14802 87 aa12.71□□□□□ -0.37
USE1-208ENST00000600970 Q499Y3 187 aa12.71□□□□□ -0.37
USE1-208ENST00000600970 GRPEL2Q8TAA5 225 aa12.71□□□□□ -0.37
USE1-208ENST00000600970 GHSRQ92847 366 aa12.71□□□□□ -0.37
USE1-208ENST00000600970 PARP12Q9H0J9 701 aaKnown RBP12.71□□□□□ -0.37
USE1-208ENST00000600970 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.37
USE1-208ENST00000600970 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.37
USE1-208ENST00000600970 LALBAP00709 142 aa12.7□□□□□ -0.38
USE1-208ENST00000600970 TRBV12-3P01733 135 aa12.7□□□□□ -0.38
USE1-208ENST00000600970 TATDN3Q17R31 274 aa12.7□□□□□ -0.38
USE1-208ENST00000600970 TMPRSS11AQ6ZMR5 421 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms