RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 FCER2P06734 321 aa15.56■□□□□ 0.08
UPF1-209ENST00000600310 RTN4IP1Q8WWV3 396 aaPredicted RBP15.56■□□□□ 0.08
UPF1-209ENST00000600310 TCF19Q9Y242 345 aa15.56■□□□□ 0.08
UPF1-209ENST00000600310 IGHV1-3A0A0C4DH29 117 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 TIMM23O14925 209 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 RAB29O14966 203 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 TXNL1O43396 289 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 REG1BP48304 166 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 ARPC4P59998 168 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 KRTAP24-1Q3LI83 254 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 PYHIN1Q6K0P9 492 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 FAM71F2Q6NXP2 309 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 ZNF833PQ6ZTB9 187 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 OR5AP2Q8NGF4 316 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 CFHR4Q92496 578 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 SOSTQ9BQB4 213 aa15.55■□□□□ 0.08
UPF1-209ENST00000600310 FBN1P35555 2871 aaKnown RBP15.54■□□□□ 0.08
UPF1-209ENST00000600310 SAA2-SAA4A0A096LPE2 208 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 FAM90A9PA6NNJ1 464 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 GPR137BO60478 399 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 SAA2P0DJI9 122 aaPredicted RBP15.54■□□□□ 0.08
UPF1-209ENST00000600310 S100A5P33763 92 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 MRPS10P82664 201 aaKnown RBP15.54■□□□□ 0.08
UPF1-209ENST00000600310 HABP2Q14520 560 aaPredicted RBP15.54■□□□□ 0.08
UPF1-209ENST00000600310 LY6EQ16553 131 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 THNSL2Q86YJ6 484 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 TGIF2LXQ8IUE1 241 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 DRAM1Q8N682 238 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 OR52I2Q8NH67 350 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 ABHD14BQ96IU4 210 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 ZNF251Q9BRH9 671 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 NECAP2Q9NVZ3 263 aa15.54■□□□□ 0.08
UPF1-209ENST00000600310 FBN3Q75N90 2809 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 A6NDX4 124 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 CTDSPLO15194 276 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 OR8U9P0C7N5 309 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 NFYAP23511 347 aaPredicted RBP15.53■□□□□ 0.08
UPF1-209ENST00000600310 RCVRNP35243 200 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 OR3A3P47888 321 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 RPL15P61313 204 aaKnown RBP15.53■□□□□ 0.08
UPF1-209ENST00000600310 IL18Q14116 193 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 CDK10Q15131 360 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 CCBE1Q6UXH8 406 aaPredicted RBP15.53■□□□□ 0.08
UPF1-209ENST00000600310 LIAT1Q6ZQX7 453 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 MOB3BQ86TA1 216 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 LYSMD2Q8IV50 215 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 OR8U1Q8NH10 309 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 OR56B4Q8NH76 319 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 TMEM158Q8WZ71 300 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 BATF3Q9NR55 127 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 ZNF221Q9UK13 617 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 PITPNC1Q9UKF7 332 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 RNF150Q9ULK6 438 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 GAB2Q9UQC2 676 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 OR2W1Q9Y3N9 320 aa15.53■□□□□ 0.08
UPF1-209ENST00000600310 FAM181BA6NEQ2 426 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 FABP12A6NFH5 140 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 GABARAPH6UMI1 98 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 TUSC2O75896 110 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 OR5H8P0DN80 308 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 CD24P25063 80 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 TAS2R46P59540 309 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.52■□□□□ 0.08
UPF1-209ENST00000600310 CAPSLQ8WWF8 208 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 FCAMRQ8WWV6 532 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 S1PR3Q99500 378 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 KLK11Q9UBX7 282 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 MTFP1Q9UDX5 166 aa15.52■□□□□ 0.08
UPF1-209ENST00000600310 COL6A5A8TX70 2615 aa15.52■□□□□ 0.07
UPF1-209ENST00000600310 CUBNO60494 3623 aa15.52■□□□□ 0.07
UPF1-209ENST00000600310 PROP1O75360 226 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 RBBP9O75884 186 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 FAM106CPP0CH98 169 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 GPR12P47775 334 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 RPL39P5Q59GN2 51 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 RNASE12Q5GAN4 147 aaKnown RBP15.51■□□□□ 0.07
UPF1-209ENST00000600310 OVCH2Q7RTZ1 564 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.51■□□□□ 0.07
UPF1-209ENST00000600310 OR6Q1Q8NGQ2 317 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 OR5H2Q8NGV7 314 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 SPATA3Q8NHX4 192 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 NABP2Q9BQ15 211 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 MRPL20Q9BYC9 149 aaKnown RBP15.51■□□□□ 0.07
UPF1-209ENST00000600310 RAB18Q9NP72 206 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 RBM7Q9Y580 266 aaKnown RBP15.51■□□□□ 0.07
UPF1-209ENST00000600310 ATRQ13535 2644 aa15.51■□□□□ 0.07
UPF1-209ENST00000600310 IGHV3-72A0A0B4J1Y9 119 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 CRYBA1P05813 215 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 SNRNP70P08621 437 aaKnown RBP15.5■□□□□ 0.07
UPF1-209ENST00000600310 HLA-DMAP28067 261 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 CD1BP29016 333 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 FCGR2CP31995 323 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 LUMP51884 338 aaPredicted RBP15.5■□□□□ 0.07
UPF1-209ENST00000600310 ACTBP60709 375 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 ACTG1P63261 375 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 DGCR2P98153 550 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 EBI3Q14213 229 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 CCDC190Q86UF4 302 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 SMIM4Q8WVI0 70 aa15.5■□□□□ 0.07
UPF1-209ENST00000600310 GIMAP1Q8WWP7 306 aa15.5■□□□□ 0.07
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