RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 IGSF11Q5DX21 431 aa12.65□□□□□ -0.38
VRK3-218ENST00000600031 STUMQ69YW2 141 aa12.65□□□□□ -0.38
VRK3-218ENST00000600031 LYPD6BQ8NI32 183 aa12.65□□□□□ -0.38
VRK3-218ENST00000600031 COQ2Q96H96 371 aa12.65□□□□□ -0.38
VRK3-218ENST00000600031 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 TRDCB7Z8K6 153 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 UCP3P55916 312 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 TEX36Q5VZQ5 186 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 FAM219AQ8IW50 185 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 ZNRF1Q8ND25 227 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 ARV1Q9H2C2 271 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 FAM212BQ9NTI7 297 aaPredicted RBP12.64□□□□□ -0.39
VRK3-218ENST00000600031 TANC2Q9HCD6 1990 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 RAI1Q7Z5J4 1906 aaPredicted RBP12.64□□□□□ -0.39
VRK3-218ENST00000600031 BORCS7-ASMTA0A0B4J1R7 106 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 IGHV1-69-2A0A0G2JMI3 117 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 F12P00748 615 aaPredicted RBP12.64□□□□□ -0.39
VRK3-218ENST00000600031 GYPAP02724 150 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 RAB13P51153 203 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 HERPUD1Q15011 391 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 HMGN3Q15651 99 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 KIAA2026Q5HYC2 2103 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 GPR157Q5UAW9 335 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 SLC35E4Q6ICL7 350 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
VRK3-218ENST00000600031 Q6ZRG5 221 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 RTN4IP1Q8WWV3 396 aaPredicted RBP12.64□□□□□ -0.39
VRK3-218ENST00000600031 TRAPPC2LQ9UL33 140 aa12.64□□□□□ -0.39
VRK3-218ENST00000600031 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 TMEM30CPA0ZSE6 113 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 H7C1Q1 480 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 GPR137BO60478 399 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 SEC11BP0C7V7 166 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 SELLP14151 372 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 LIAT1Q6ZQX7 453 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 DTX2Q86UW9 622 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 TPRX1Q8N7U7 411 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 TOMM40LQ969M1 308 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 SNX22Q96L94 193 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 BIN3Q9NQY0 253 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 MBNL3Q9NUK0 354 aaKnown RBP12.63□□□□□ -0.39
VRK3-218ENST00000600031 KPTNQ9Y664 436 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 DCHS2Q6V1P9 2916 aa12.63□□□□□ -0.39
VRK3-218ENST00000600031 KIR2DS1A0A191URI9 304 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 LYNX1G3V0Z9 82 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 SCGB1D2O95969 90 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 MBPP02686 304 aaPredicted RBP12.62□□□□□ -0.39
VRK3-218ENST00000600031 OR5AC1P0C628 307 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 LYNX1P0DP58 116 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 KIR2DS4P43632 304 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 GLIPR1P48060 266 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 KCNJ3P48549 501 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 HLA-DRB3P79483 266 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 KIR2DS1Q14954 304 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 AVPI1Q5T686 147 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 C1orf87Q8N0U7 546 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 LGI3Q8N145 548 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 SDSLQ96GA7 329 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 C18orf12Q96KH6 178 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 CCL13Q99616 98 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 UBTD1Q9HAC8 227 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 PLA2G2EQ9NZK7 142 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 FAM208BQ5VWN6 2430 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 PPIAL4EA0A075B759 164 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 PPIAL4DF5H284 164 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 K7N7A8 449 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 PPIAL4FP0DN26 164 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 COL8A2P25067 703 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 PEA15Q15121 130 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 CCDC71LQ8N9Z2 235 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 FBXO9Q9UK97 447 aaPredicted RBP12.62□□□□□ -0.39
VRK3-218ENST00000600031 PPIAL4AQ9Y536 164 aa12.62□□□□□ -0.39
VRK3-218ENST00000600031 TK1P04183 234 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 GLP1RP43220 463 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 P2RY1P47900 373 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 EDDM3AQ14507 147 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 ZNF788Q6ZQV5 615 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 MOB1BQ7L9L4 216 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 UBALD1Q8TB05 177 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 GLYATL2Q8WU03 294 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 MOB3AQ96BX8 217 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 SMIM3Q9BZL3 60 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 SLC2A9Q9NRM0 540 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 TRAV38-1A0A0B4J264 116 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 MGST3O14880 152 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 PAX6P26367 422 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 RAB5CP51148 216 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 FXYD4P59646 89 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 PAX5Q02548 391 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 SP6Q3SY56 376 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 PRR18Q8N4B5 295 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 FAM216BQ8N7L0 139 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms