RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NPBQ8NG41 125 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 OR2AK2Q8NG84 335 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 DCUN1D4Q92564 292 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 FCGR1BQ92637 280 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 GALMQ96C23 342 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 YPEL2Q96QA6 119 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 OR5B12Q96R08 314 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 SELENOIQ9C0D9 397 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 ABRACLQ9P1F3 81 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 GHRLQ9UBU3 117 aa13.2□□□□□ -0.3
PNKP-210ENST00000597965 IGHV7-81A0A0B4J1V7 117 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 CRTAPO75718 401 aaPredicted RBP13.19□□□□□ -0.3
PNKP-210ENST00000597965 MGMTP16455 207 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 TAS2R43P59537 309 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 GNB1P62873 340 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 OR2G6Q5TZ20 316 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 ZNF833PQ6ZTB9 187 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 NKAIN3Q8N8D7 197 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 ISOC1Q96CN7 298 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 FLYWCH2Q96CP2 140 aaKnown RBP13.19□□□□□ -0.3
PNKP-210ENST00000597965 TMEM80Q96HE8 168 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 STEAP1Q9UHE8 339 aa13.19□□□□□ -0.3
PNKP-210ENST00000597965 DIMT1Q9UNQ2 313 aaKnown RBP13.19□□□□□ -0.3
PNKP-210ENST00000597965 FOXA2Q9Y261 457 aaPredicted RBP13.19□□□□□ -0.3
PNKP-210ENST00000597965 NDUFA3O95167 84 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 MAS1P04201 325 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 GP9P14770 177 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 BLVRBP30043 206 aaPredicted RBP13.18□□□□□ -0.3
PNKP-210ENST00000597965 TMBIM6P55061 237 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 ASPHD1Q5U4P2 390 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 DMKNQ6E0U4 476 aaPredicted RBP13.18□□□□□ -0.3
PNKP-210ENST00000597965 YIPF6Q96EC8 236 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 UQCC2Q9BRT2 126 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 MRPL20Q9BYC9 149 aaKnown RBP13.18□□□□□ -0.3
PNKP-210ENST00000597965 NAA50Q9GZZ1 169 aaKnown RBP13.18□□□□□ -0.3
PNKP-210ENST00000597965 TOLLIPQ9H0E2 274 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 PIPOXQ9P0Z9 390 aa13.18□□□□□ -0.3
PNKP-210ENST00000597965 A0A1W2PN81 502 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 PDCD6O75340 191 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 LGALS1P09382 135 aaKnown RBP13.17□□□□□ -0.3
PNKP-210ENST00000597965 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 SPNP16150 400 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 MC5RP33032 325 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 CHRNA7P36544 502 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 CRIP2P52943 208 aaPredicted RBP13.17□□□□□ -0.3
PNKP-210ENST00000597965 PLGLAQ15195 96 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 ECSCRQ19T08 205 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 ACSM6Q6P461 480 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 ANKRD13BQ86YJ7 626 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 ODF3L1Q8IXM7 274 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 DLX4Q92988 240 aaPredicted RBP13.17□□□□□ -0.3
PNKP-210ENST00000597965 Q96M66 194 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 BANF2Q9H503 90 aa13.17□□□□□ -0.3
PNKP-210ENST00000597965 TRAV8-7A0A075B6U6 113 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 OR5H14A6NHG9 310 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 RAB29O14966 203 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 RBBP9O75884 186 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 MAPK3P27361 379 aaPredicted RBP13.16□□□□□ -0.3
PNKP-210ENST00000597965 PSMB9P28065 219 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 PPP1CCP36873 323 aaKnown RBP13.16□□□□□ -0.3
PNKP-210ENST00000597965 PITPNAQ00169 270 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 ZNF367Q7RTV3 350 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 OR13C5Q8NGS8 318 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 ORAI1Q96D31 301 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 NEDD4LQ96PU5 975 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 OR14A2Q96R54 314 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 CITED4Q96RK1 184 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 RNF5Q99942 180 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 ELOVL1Q9BW60 279 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 FUNDC2Q9BWH2 189 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 SLA2Q9H6Q3 261 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 PTTG2Q9NZH5 202 aa13.16□□□□□ -0.3
PNKP-210ENST00000597965 SAA2-SAA4A0A096LPE2 208 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 TRBV5-7A0A0A0MS05 114 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 H3BMQ9 156 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 HSPB1P04792 205 aaKnown RBP13.15□□□□□ -0.3
PNKP-210ENST00000597965 UBBP0CG47 229 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 SAA2P0DJI9 122 aaPredicted RBP13.15□□□□□ -0.3
PNKP-210ENST00000597965 CNTFRP26992 372 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
PNKP-210ENST00000597965 GNMTQ14749 295 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 AKIRIN2Q53H80 203 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 OVCH2Q7RTZ1 564 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 LYPD6Q86Y78 171 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 MRPL30Q8TCC3 161 aaKnown RBP13.15□□□□□ -0.3
PNKP-210ENST00000597965 PGLYRP3Q96LB9 341 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 CLEC2DQ9UHP7 191 aa13.15□□□□□ -0.3
PNKP-210ENST00000597965 LSM2Q9Y333 95 aaKnown RBP13.15□□□□□ -0.3
PNKP-210ENST00000597965 RRHO14718 337 aa13.14□□□□□ -0.31
PNKP-210ENST00000597965 LDLRAD4O15165 306 aa13.14□□□□□ -0.31
PNKP-210ENST00000597965 GSTP1P09211 210 aaKnown RBP13.14□□□□□ -0.31
PNKP-210ENST00000597965 SLURP1P55000 103 aa13.14□□□□□ -0.31
PNKP-210ENST00000597965 ACTBL2Q562R1 376 aa13.14□□□□□ -0.31
PNKP-210ENST00000597965 ABHD5Q8WTS1 349 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms