RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 IFI27L2Q9H2X8 130 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 DPAGT1Q9H3H5 408 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 PIPOXQ9P0Z9 390 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 ZNF221Q9UK13 617 aa17.86■□□□□ 0.45
CHMP2A-204ENST00000597848 BTBD17A6NE02 478 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 RAB29O14966 203 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 GSTZ1O43708 216 aaPredicted RBP17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 IGHV4-59P01825 116 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 IER3P46695 156 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 GPR12P47775 334 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 HILS1P60008 231 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 SSBP1Q04837 148 aaKnown RBP17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 SVEP1Q4LDE5 3571 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 ST6GALNAC6Q969X2 333 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 OR2W1Q9Y3N9 320 aa17.85■□□□□ 0.45
CHMP2A-204ENST00000597848 MXRA5Q9NR99 2828 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 A0A0A6YYJ9 748 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 H3BUX3 64 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 BRS3P32247 399 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 RAB13P51153 203 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 LUMP51884 338 aaPredicted RBP17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 ZNF79Q15937 498 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 OVCH2Q7RTZ1 564 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 MOB3BQ86TA1 216 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 TGIF2LXQ8IUE1 241 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 ODF3L1Q8IXM7 274 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 S1PR3Q99500 378 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 AGMATQ9BSE5 352 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 THAP7Q9BT49 309 aaPredicted RBP17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 GHITMQ9H3K2 345 aa17.84■□□□□ 0.45
CHMP2A-204ENST00000597848 NIPBLQ6KC79 2804 aaeCLIP17.83■□□□□ 0.45
CHMP2A-204ENST00000597848 SAA2-SAA4A0A096LPE2 208 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 DNAJC9-AS1A6NH13 148 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 VGLL3A8MV65 326 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 M0QYG6 137 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 SAA2P0DJI9 122 aaPredicted RBP17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 ZNF137PP52743 207 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 TAS2R19P59542 299 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 TSPAN5P62079 268 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 ZNF816Q0VGE8 651 aaPredicted RBP17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 DYRK1AQ13627 763 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 SLC9A3R2Q15599 337 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 AANATQ16613 207 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 ACTBL2Q562R1 376 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 OR8H3Q8N146 312 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 Q8N402 240 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 TMEM229BQ8NBD8 167 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 RTN4IP1Q8WWV3 396 aaPredicted RBP17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 OR2D2Q9H210 308 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 ESM1Q9NQ30 184 aa17.83■□□□□ 0.44
CHMP2A-204ENST00000597848 IGHV1-3A0A0C4DH29 117 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 TIMM23O14925 209 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 LANCL1O43813 399 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 VENTXO95231 258 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 CD3DP04234 171 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 IFNA6P05013 189 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 CSF1P09603 554 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 AADACP22760 399 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 RPL39P5Q59GN2 51 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 RNASE10Q5GAN6 216 aaKnown RBP17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 DRAM1Q8N682 238 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 ZDHHC22Q8N966 263 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 OR5R1Q8NH85 324 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 GIMAP1Q8WWP7 306 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 TAS2R8Q9NYW2 309 aa17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 RBMX2Q9Y388 322 aaKnown RBP17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 SETD2Q9BYW2 2564 aaPredicted RBP17.82■□□□□ 0.44
CHMP2A-204ENST00000597848 A0A1W2PPI3 338 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 TXNL1O43396 289 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 TUSC2O75896 110 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 HERV-K104P61576 105 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 SRSF2Q01130 221 aaKnown RBP17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 ZNF45Q02386 682 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 LY6EQ16553 131 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 DHRS11Q6UWP2 260 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 LINC00299Q6ZSB3 139 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 ZNF833PQ6ZTB9 187 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 TMEM86BQ8N661 226 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 OR6F1Q8NGZ6 308 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 CAPSLQ8WWF8 208 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 ZNF2Q9BSG1 426 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 SRRQ9GZT4 340 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 ZNF107Q9UII5 783 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 POMT1Q9Y6A1 747 aa17.81■□□□□ 0.44
CHMP2A-204ENST00000597848 RAB3DO95716 219 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 PPYP01298 95 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 TBPP20226 339 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 CD24P25063 80 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 DYNLT3P51808 116 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 FXYD4P59646 89 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 STEAP1BQ6NZ63 245 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 PRIMA1Q86XR5 153 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 GDPD1Q8N9F7 314 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 OR56B4Q8NH76 319 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 FAM216AQ8WUB2 273 aa17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 TINAGL1Q9GZM7 467 aaPredicted RBP17.8■□□□□ 0.44
CHMP2A-204ENST00000597848 IGHV3-72A0A0B4J1Y9 119 aa17.79■□□□□ 0.44
CHMP2A-204ENST00000597848 IGKV1D-13A0A0B4J2D9 117 aa17.79■□□□□ 0.44
CHMP2A-204ENST00000597848 TRIM77I1YAP6 450 aa17.79■□□□□ 0.44
CHMP2A-204ENST00000597848 IGKV1-13P0DP09 117 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms