RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 HMGN3Q15651 99 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 SMN1Q16637 294 aaKnown RBP7.62□□□□□ -1.19
LIG1-209ENST00000596104 Q499Y3 187 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 AKIRIN2Q53H80 203 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 ACTBL2Q562R1 376 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 DMKNQ6E0U4 476 aaPredicted RBP7.62□□□□□ -1.19
LIG1-209ENST00000596104 UNQ5815/PRO19632Q6UWF5 114 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 IL34Q6ZMJ4 242 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 PPP1R27Q86WC6 154 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 JAGN1Q8N5M9 183 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 OR2AK2Q8NG84 335 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 GHSRQ92847 366 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 MS4A10Q96PG2 267 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 OR14A2Q96R54 314 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 THAP7Q9BT49 309 aaPredicted RBP7.62□□□□□ -1.19
LIG1-209ENST00000596104 FAM103A1Q9BTL3 118 aaKnown RBP7.62□□□□□ -1.19
LIG1-209ENST00000596104 ELOVL1Q9BW60 279 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 SLA2Q9H6Q3 261 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 BABAM2Q9NXR7 383 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 RNF150Q9ULK6 438 aa7.62□□□□□ -1.19
LIG1-209ENST00000596104 OR5H14A6NHG9 310 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 H0YJW9 148 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 ST8SIA5O15466 376 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 WBP4O75554 376 aaKnown RBP7.61□□□□□ -1.19
LIG1-209ENST00000596104 RGS11O94810 467 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 DCKP27707 260 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 RPL39P5Q59GN2 51 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 YIF1BQ5BJH7 314 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 AWAT2Q6E213 333 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 ZNF562Q6V9R5 426 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 GLDNQ6ZMI3 551 aaPredicted RBP7.61□□□□□ -1.19
LIG1-209ENST00000596104 TMPRSS11AQ6ZMR5 421 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 ANKRD13BQ86YJ7 626 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 CDH26Q8IXH8 852 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 ZNF485Q8NCK3 441 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 LFNGQ8NES3 379 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 OR5AN1Q8NGI8 311 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 ABHD5Q8WTS1 349 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 GALMQ96C23 342 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 PGLYRP3Q96LB9 341 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 RSRP1Q9BUV0 290 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 PARP12Q9H0J9 701 aaKnown RBP7.61□□□□□ -1.19
LIG1-209ENST00000596104 PIPOXQ9P0Z9 390 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 CKLFQ9UBR5 152 aa7.61□□□□□ -1.19
LIG1-209ENST00000596104 LOC100130705A0A1B0GUX0 176 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 A0A1W2PPK0 400 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 RAB29O14966 203 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 CRTAPO75718 401 aaPredicted RBP7.6□□□□□ -1.19
LIG1-209ENST00000596104 CIB2O75838 187 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 RBBP9O75884 186 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 JTBO76095 146 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 BAG2O95816 211 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 TRGV3P03979 118 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 TFAP2AP05549 437 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 ZP3P21754 424 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 KLF5Q13887 457 aaPredicted RBP7.6□□□□□ -1.19
LIG1-209ENST00000596104 PLGLAQ15195 96 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 PSG5Q15238 335 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 ZFP41Q8N8Y5 198 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 SLC29A1Q99808 456 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 RNF5Q99942 180 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 SULT4A1Q9BR01 284 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 RANGRFQ9HD47 186 aaPredicted RBP7.6□□□□□ -1.19
LIG1-209ENST00000596104 SLC23A1Q9UHI7 598 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 CLEC2DQ9UHP7 191 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 WASHC3Q9Y3C0 194 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 LRRC42Q9Y546 428 aa7.6□□□□□ -1.19
LIG1-209ENST00000596104 H0Y980 276 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 H3BUA1 57 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 PROP1O75360 226 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 ATP5HO75947 161 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 CA2P00918 260 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 IFNA6P05013 189 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 GSTP1P09211 210 aaKnown RBP7.59□□□□□ -1.19
LIG1-209ENST00000596104 CD40LGP29965 261 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 MC5RP33032 325 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 SSBP2P81877 361 aaPredicted RBP7.59□□□□□ -1.19
LIG1-209ENST00000596104 ZNF880Q6PDB4 577 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 LINC00322Q6ZN03 302 aaPredicted RBP7.59□□□□□ -1.19
LIG1-209ENST00000596104 SVOPQ8N4V2 548 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 POC5Q8NA72 575 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 OR9G4Q8NGQ1 327 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 IL1F10Q8WWZ1 152 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 FAM46BQ96A09 425 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 ABHD14BQ96IU4 210 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 DERL3Q96Q80 235 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 CLCC1Q96S66 551 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 AGMATQ9BSE5 352 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 RETNQ9HD89 108 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 METTL1Q9UBP6 276 aaKnown RBP7.59□□□□□ -1.19
LIG1-209ENST00000596104 STEAP1Q9UHE8 339 aa7.59□□□□□ -1.19
LIG1-209ENST00000596104 DIMT1Q9UNQ2 313 aaKnown RBP7.59□□□□□ -1.19
LIG1-209ENST00000596104 EXOSC1Q9Y3B2 195 aaKnown RBP7.59□□□□□ -1.19
LIG1-209ENST00000596104 H7C2Y5 167 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 ITGB1BP1O14713 200 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 SLC22A1O15245 554 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 SPDEFO95238 335 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 NAPSAO96009 420 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 IGKV1-16P04430 117 aa7.58□□□□□ -1.2
LIG1-209ENST00000596104 CSN3P07498 182 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms