RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 UBE2QL1A1L167 161 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 TMEM14DPA8MWL7 114 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 C12orf77C9JDV5 145 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 SDCBPO00560 298 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 DENRO43583 198 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 CA11O75493 328 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 VDAC1P21796 283 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 CALRP27797 417 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 REG1BP48304 166 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 QRFPP83859 136 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 MADCAM1Q13477 382 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 MOB3BQ86TA1 216 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 OR52M1Q8NGK5 317 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 UBE2E2Q96LR5 201 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 FAM110AQ9BQ89 295 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 NICN1Q9BSH3 213 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 TM2D1Q9BX74 207 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 Q9H521 79 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 LIN7CQ9NUP9 197 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 GFOD1Q9NXC2 390 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 TRAPPC2LQ9UL33 140 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 AK6Q9Y3D8 172 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 TNCP24821 2201 aa10.59□□□□□ -0.71
SHKBP1-208ENST00000595726 IGHV3-43A0A0B4J1X8 118 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 A8MZ25 164 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 SLC17A2O00624 439 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 MRPS14O60783 128 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 BPNT1O95861 308 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 IGHV3-43DP0DP04 118 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 RCC1P18754 421 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 RUNX1Q01196 453 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 EBI3Q14213 229 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 C6orf183Q5T699 404 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 ACSM6Q6P461 480 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 TRAT1Q6PIZ9 186 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 OR8H3Q8N146 312 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 Q8N6K4 173 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 OR10X1Q8NGY0 326 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 IL17DQ8TAD2 202 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 KCNG3Q8TAE7 436 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 MRPL30Q8TCC3 161 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 PLGRKTQ9HBL7 147 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 MBNL3Q9NUK0 354 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 NDUFB11Q9NX14 153 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 VSIG4Q9Y279 399 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 WSB1Q9Y6I7 421 aa10.58□□□□□ -0.72
SHKBP1-208ENST00000595726 A0A0A6YYD4 124 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 HSD17B6O14756 317 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 HBZP02008 142 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 ARSBP15848 533 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 CNTFRP26992 372 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 RAB7AP51149 207 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 P2RY14Q15391 338 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 Q3ZCU0 254 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 TMEM65Q6PI78 240 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 CD200R1LQ6Q8B3 271 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 SGPP2Q8IWX5 399 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 PRR18Q8N4B5 295 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 SVOPQ8N4V2 548 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 C8orf31Q8N9H6 132 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 OR1L1Q8NH94 360 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 NEDD4LQ96PU5 975 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 SULT4A1Q9BR01 284 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 LPAR5Q9H1C0 372 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 RAB9BQ9NP90 201 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 VPS13DQ5THJ4 4388 aa10.57□□□□□ -0.72
SHKBP1-208ENST00000595726 SHISA3A0PJX4 238 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF736B4DX44 427 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 G3V318 75 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 SLC31A2O15432 143 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 SPINT2O43291 252 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF816Q0VGE8 651 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 RAB11BQ15907 218 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 UBE2UQ5VVX9 321 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 C6orf201Q7Z4U5 140 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF554Q86TJ5 538 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 SPARTQ8N0X7 666 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 RPP25LQ8N5L8 163 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF439Q8NDP4 499 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 S1PR3Q99500 378 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 RASL11BQ9BPW5 248 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 GHITMQ9H3K2 345 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 TAF9BQ9HBM6 251 aa10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 RRP15Q9Y3B9 282 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-208ENST00000595726 IGHV1-3A0A0C4DH29 117 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 IGF1P05019 195 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 BLVRBP30043 206 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 PPIFP30405 207 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 F2RL1P55085 397 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 CLDN12P56749 244 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 SLC25A48Q6ZT89 311 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 C5orf24Q7Z6I8 188 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 OR10V1Q8NGI7 309 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 OR2T10Q8NGZ9 312 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 OR4C12Q96R67 309 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 FAAP24Q9BTP7 215 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 YTHDF1Q9BYJ9 559 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms