RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	ITGB1BP1	O14713	200 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	DIRAS3	O95661	229 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	SAA2	P0DJI9	122 aa	Predicted RBP	18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	TGIF2LX	Q8IUE1	241 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	BEST4	Q8NFU0	473 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	AGMAT	Q9BSE5	352 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	C6orf62	Q9GZU0	229 aa	Predicted RBP	18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	RNF150	Q9ULK6	438 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	DPPA5	A6NC42	116 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	LANCL1	O43813	399 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	SNRNP70	P08621	437 aa	Known RBP	18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	PRSS3	P35030	304 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	CBX5	P45973	191 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	CNIH2	Q6PI25	160 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	LIAT1	Q6ZQX7	453 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	SNAPC3	Q92966	411 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	RBMXL1	Q96E39	390 aa	Known RBP	18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	TOLLIP	Q9H0E2	274 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	IFT46	Q9NQC8	304 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	PITPNC1	Q9UKF7	332 aa		18.35	■□□□□ 0.53
PNKP-205	ENST00000595081	TMEM89	A2RUT3	159 aa		18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	FAM90A9P	A6NNJ1	464 aa		18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	RPL15	P61313	204 aa	Known RBP	18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	RPL39P5	Q59GN2	51 aa		18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	ZNF833P	Q6ZTB9	187 aa		18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	H1FOO	Q8IZA3	346 aa	Predicted RBP	18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	MCFD2	Q8NI22	146 aa		18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	MRPL20	Q9BYC9	149 aa	Known RBP	18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	PIPOX	Q9P0Z9	390 aa		18.34	■□□□□ 0.53
PNKP-205	ENST00000595081	ZNF736	B4DX44	427 aa	Predicted RBP	18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	RAB29	O14966	203 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	TXNL1	O43396	289 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	LPL	P06858	475 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	CTXN2	P0C2S0	81 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	OR8U9	P0C7N5	309 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	RAG2	P55895	527 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	ARPC4	P59998	168 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	HES1	Q14469	280 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	HABP2	Q14520	560 aa	Predicted RBP	18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	OR8U1	Q8NH10	309 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	ZNF251	Q9BRH9	671 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	NXF2	Q9GZY0	626 aa	Known RBP	18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	RAB18	Q9NP72	206 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	ADAM30	Q9UKF2	790 aa		18.33	■□□□□ 0.52
PNKP-205	ENST00000595081	IGKV1D-33	P01593	117 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	IGKV1-33	P01594	117 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	FAM106CP	P0CH98	169 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	NFYA	P23511	347 aa	Predicted RBP	18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	HNF4G	Q14541	408 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	RNASE12	Q5GAN4	147 aa	Known RBP	18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	FOXB2	Q5VYV0	432 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081		Q6ZSV7	163 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	THNSL2	Q86YJ6	484 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	GPX8	Q8TED1	209 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081	ANAPC10	Q9UM13	185 aa		18.32	■□□□□ 0.52
PNKP-205	ENST00000595081		J3QRK9	145 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	NDUFA7	O95182	113 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	MDK	P21741	143 aa	Predicted RBP	18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	GPR12	P47775	334 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	ABHD1	Q96SE0	405 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	S1PR3	Q99500	378 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	NABP2	Q9BQ15	211 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	SLC25A33	Q9BSK2	321 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	OR2D2	Q9H210	308 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	SCPEP1	Q9HB40	452 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	ZNF221	Q9UK13	617 aa		18.31	■□□□□ 0.52
PNKP-205	ENST00000595081	TENM1	Q9UKZ4	2725 aa		18.3	■□□□□ 0.52
PNKP-205	ENST00000595081	STAB1	Q9NY15	2570 aa		18.3	■□□□□ 0.52
PNKP-205	ENST00000595081	LSAMP	Q13449	338 aa		18.3	■□□□□ 0.52
PNKP-205	ENST00000595081	AWAT1	Q58HT5	328 aa		18.3	■□□□□ 0.52
PNKP-205	ENST00000595081	DIRAS2	Q96HU8	199 aa		18.3	■□□□□ 0.52
PNKP-205	ENST00000595081	RBM14	Q96PK6	669 aa	Known RBP	18.3	■□□□□ 0.52
PNKP-205	ENST00000595081	RBM7	Q9Y580	266 aa	Known RBP	18.3	■□□□□ 0.52
PNKP-205	ENST00000595081	PROP1	O75360	226 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	OR2F2	O95006	317 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	TMEM11	P17152	192 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	CD1B	P29016	333 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	FOXL1	Q12952	345 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	FAM71F2	Q6NXP2	309 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	OR5AP2	Q8NGF4	316 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	OR4F5	Q8NH21	305 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	DGCR14	Q96DF8	476 aa	Known RBP	18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	EAF1	Q96JC9	268 aa	Predicted RBP	18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	NPFFR1	Q9GZQ6	430 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	GHITM	Q9H3K2	345 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	NECAP2	Q9NVZ3	263 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	NDUFA13	Q9P0J0	144 aa		18.29	■□□□□ 0.52
PNKP-205	ENST00000595081	CT45A6	P0DMU7	189 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	CT45A5	P0DMU8	189 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	CT45A7	P0DMV0	189 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	NAT1	P18440	290 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	GLDN	Q6ZMI3	551 aa	Predicted RBP	18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	DRAXIN	Q8NBI3	349 aa	Predicted RBP	18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	OR4C13	Q8NGP0	309 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	OR52I2	Q8NH67	350 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	C5orf30	Q96GV9	206 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	OR2W1	Q9Y3N9	320 aa		18.28	■□□□□ 0.52
PNKP-205	ENST00000595081	SULT1C2	O00338	296 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	TSPAN9	O75954	239 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	OR5H8	P0DN80	308 aa		18.27	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms