RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 IGKV1-33P01594 117 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 ERVK11-1P61568 191 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 VWC2Q2TAL6 325 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 ACOT6Q3I5F7 207 aaPredicted RBP11.19□□□□□ -0.62
VRK3-209ENST00000594948 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
VRK3-209ENST00000594948 FGFRL1Q8N441 504 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 TCTEX1D1Q8N7M0 179 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 PARLQ9H300 379 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 ZNF703Q9H7S9 590 aaPredicted RBP11.19□□□□□ -0.62
VRK3-209ENST00000594948 KCNS2Q9ULS6 477 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 LAMP3Q9UQV4 416 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 POLDIP2Q9Y2S7 368 aa11.19□□□□□ -0.62
VRK3-209ENST00000594948 RBM7Q9Y580 266 aaKnown RBP11.19□□□□□ -0.62
VRK3-209ENST00000594948 SOX15O60248 233 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 GZMBP10144 247 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 TAS2R60P59551 318 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 PEAR1Q5VY43 1037 aaPredicted RBP11.18□□□□□ -0.62
VRK3-209ENST00000594948 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 C17orf78Q8N4C9 275 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 CISD2Q8N5K1 135 aaKnown RBP11.18□□□□□ -0.62
VRK3-209ENST00000594948 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 BEND2Q8NDZ0 799 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 TRAPPC2LQ9UL33 140 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 GAB2Q9UQC2 676 aa11.18□□□□□ -0.62
VRK3-209ENST00000594948 SDK1Q7Z5N4 2213 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 PMS2P5A8MQ11 134 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 CD99P14209 185 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 COX5AP20674 150 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 WNT5AP41221 380 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 FOXG1P55316 489 aaPredicted RBP11.17□□□□□ -0.62
VRK3-209ENST00000594948 ZNF146Q15072 292 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 TMEM249Q2WGJ8 235 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 C9orf135Q5VTT2 229 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 BEND4Q6ZU67 534 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 NEIL1Q96FI4 390 aaPredicted RBP11.17□□□□□ -0.62
VRK3-209ENST00000594948 CIB3Q96Q77 187 aaPredicted RBP11.17□□□□□ -0.62
VRK3-209ENST00000594948 RANBP2P49792 3224 aaKnown RBP11.17□□□□□ -0.62
VRK3-209ENST00000594948 SZT2Q5T011 3432 aa11.17□□□□□ -0.62
VRK3-209ENST00000594948 A0A1W2PR80 420 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 XKRY2A2RUG3 117 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 LILRA1O75019 489 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 RHBDL1O75783 438 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 CLDN1O95832 211 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 OR2H2O95918 312 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
VRK3-209ENST00000594948 GZMHP20718 246 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 CCKARP32238 428 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 LCN2P80188 198 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 EIF4EBP1Q13541 118 aaPredicted RBP11.16□□□□□ -0.62
VRK3-209ENST00000594948 DCAF12Q5T6F0 453 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 OR10G9Q8NGN4 311 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 OR10G7Q8NGN6 311 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 NANOS1Q8WY41 292 aaKnown RBP11.16□□□□□ -0.62
VRK3-209ENST00000594948 DIRC2Q96SL1 478 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 GP6Q9HCN6 339 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
VRK3-209ENST00000594948 SIT1Q9Y3P8 196 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 ZNF407Q9C0G0 2248 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 ARGFXA6NJG6 315 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 LRRC30A6NM36 301 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 A8MWP6 167 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 SH2D1BO14796 132 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 RAB29O14966 203 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 WDR1O75083 606 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 GYPAP02724 150 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 JMJD7P0C870 316 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
VRK3-209ENST00000594948 CATR1Q13166 79 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 OR8G2PQ6IF36 304 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 KCNIP4Q6PIL6 250 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 OR2T10Q8NGZ9 312 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 CT55Q8WUE5 264 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 RPUSD4Q96CM3 377 aaKnown RBP11.16□□□□□ -0.62
VRK3-209ENST00000594948 MEGF10Q96KG7 1140 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 IMMP2LQ96T52 175 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 OR6C3Q9NZP0 311 aa11.16□□□□□ -0.62
VRK3-209ENST00000594948 A0A1B0GV90 55 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 SIRPB1O00241 398 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 CD55P08174 381 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 CA6P23280 308 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 NUBP1P53384 320 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 Q3ZCU0 254 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 C6orf15Q6UXA7 325 aaPredicted RBP11.15□□□□□ -0.62
VRK3-209ENST00000594948 OR10P1Q8NGE3 313 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 OR1K1Q8NGR3 316 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 OR4F5Q8NH21 305 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 TMEM18Q96B42 140 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 ZPBPQ9BS86 351 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 SLC25A22Q9H936 323 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 KCNIP1Q9NZI2 227 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 TP53TG5Q9Y2B4 290 aa11.15□□□□□ -0.62
VRK3-209ENST00000594948 NEURL1O76050 574 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms