RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 SLC26A7Q8TE54 656 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 CCDC107Q8WV48 283 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 LZICQ8WZA0 190 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 RFT1Q96AA3 541 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 RSRC1Q96IZ7 334 aaKnown RBP1.99□□□□□ -2.09
VRK3-204ENST00000593912 C7orf26Q96N11 449 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 OR14A2Q96R54 314 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 COMMD4Q9H0A8 199 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 DCAF13Q9NV06 445 aaKnown RBP1.99□□□□□ -2.09
VRK3-204ENST00000593912 FAM118AQ9NWS6 357 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 VAPAQ9P0L0 249 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 ING4Q9UNL4 249 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 EXOSC1Q9Y3B2 195 aaKnown RBP1.99□□□□□ -2.09
VRK3-204ENST00000593912 UFC1Q9Y3C8 167 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 PUS1Q9Y606 427 aaKnown RBP eCLIP1.99□□□□□ -2.09
VRK3-204ENST00000593912 RFNGQ9Y644 331 aa1.99□□□□□ -2.09
VRK3-204ENST00000593912 SAA2-SAA4A0A096LPE2 208 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 TRAV24A0A0B4J272 114 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 A0A0U1RQV5 110 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 LOC102723971A0A1B0GUV8 181 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 MFSD2BA6NFX1 497 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 ZNF705FA8MVS1 300 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 H0YJW9 148 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 H0YJX3 145 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 GOLGA6L22H0YM25 854 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 H7C2Y5 167 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 LECT2O14960 151 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 DEGS1O15121 323 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 MPPED1O15442 326 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 SPINT2O43291 252 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 PSCAO43653 123 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 SULT1B1O43704 296 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 DHRS3O75911 302 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 NXPH4O95158 308 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 FADS2O95864 444 aaKnown RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 IGKV1-16P04430 117 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 PRM2P04554 102 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 FCER2P06734 321 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 ZNF705DP0CH99 300 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 ZNF705BP0CI00 300 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 SAA2P0DJI9 122 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 LBPP18428 481 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 GALP22466 123 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 EPHA2P29317 976 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 GSTT1P30711 240 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 GPR183P32249 361 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 SOX2P48431 317 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 CMC4P56277 68 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 FXYD7P58549 80 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 RPS7P62081 194 aaKnown RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 ST3GAL3Q11203 375 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 FCN2Q15485 313 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 ACOT6Q3I5F7 207 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 CCDC153Q494R4 210 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 RPL39P5Q59GN2 51 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 ACTL10Q5JWF8 245 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 SLC25A30Q5SVS4 291 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 OR10K2Q6IF99 312 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 ZNF529Q6P280 563 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 ZNF705AQ6ZN79 300 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 ZNF833PQ6ZTB9 187 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 MBOAT2Q6ZWT7 520 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 SSX9Q7RTT3 188 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 AMIGO2Q86SJ2 522 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 ERI1Q8IV48 349 aaKnown RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 Q8IYB0 196 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 PRR18Q8N4B5 295 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 ZNF781Q8N8C0 355 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 OR52M1Q8NGK5 317 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 OR6K6Q8NGW6 343 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 FANK1Q8TC84 345 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 MZB1Q8WU39 189 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 GLMPQ8WWB7 406 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 TMEM190Q8WZ59 177 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 RBPMSQ93062 196 aaKnown RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 MRPS24Q96EL2 167 aaKnown RBP1.98□□□□□ -2.09
VRK3-204ENST00000593912 MISP3Q96FF7 219 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 ABHD14AQ9BUJ0 271 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 C20orf24Q9BUV8 137 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 SLC35D1Q9NTN3 355 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 MSRB1Q9NZV6 116 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 GNG12Q9UBI6 72 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 DCDC2Q9UHG0 476 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 SNX13Q9Y5W8 968 aa1.98□□□□□ -2.09
VRK3-204ENST00000593912 TRAV26-1A0A087WT03 109 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 UNC119BA6NIH7 251 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 MARCH11A6NNE9 402 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CHEK1O14757 476 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 FFAR1O14842 300 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ITM2AO43736 263 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ADAP1O75689 374 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CLEC3BP05452 202 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ZNF688P0C7X2 276 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CT45A6P0DMU7 189 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CT45A5P0DMU8 189 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CT45A7P0DMV0 189 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ATP6V1B1P15313 513 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 H2AFXP16104 143 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms