RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 HTR3BO95264 441 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 LYL1P12980 280 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 ARF6P62330 175 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 CDNFQ49AH0 187 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 DMBX1Q8NFW5 382 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 OR5D13Q8NGL4 314 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 SNX22Q96L94 193 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 UQCC2Q9BRT2 126 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 SEC11CQ9BY50 192 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 SHPKQ9UHJ6 478 aa16.15■□□□□ 0.18
LSM4-203ENST00000593829 SNAPINO95295 136 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 CSTBP04080 98 aaKnown RBP16.14■□□□□ 0.17
LSM4-203ENST00000593829 GABRR1P24046 479 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 CBX5P45973 191 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 RAB13P51153 203 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 LRRC37A5PQ49AS3 106 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 TRAPPC6BQ86SZ2 158 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 BAP18Q8IXM2 172 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 IFT22Q9H7X7 185 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 BIN3Q9NQY0 253 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 ONECUT1Q9UBC0 465 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 ANAPC10Q9UM13 185 aa16.14■□□□□ 0.17
LSM4-203ENST00000593829 MRPS28Q9Y2Q9 187 aaKnown RBP16.14■□□□□ 0.17
LSM4-203ENST00000593829 TOX4O94842 621 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 BPNT1O95861 308 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 OR2H2O95918 312 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 FSHBP01225 129 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 PVALBP20472 110 aaPredicted RBP16.13■□□□□ 0.17
LSM4-203ENST00000593829 QRFPP83859 136 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 SCGB2A2Q13296 93 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 GUCA2BQ16661 112 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 AWAT2Q6E213 333 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 OR51T1Q8NGJ9 327 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 PPP1R35Q8TAP8 253 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 PCGF1Q9BSM1 259 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 CHMP1AQ9HD42 196 aaPredicted RBP16.13■□□□□ 0.17
LSM4-203ENST00000593829 CYTL1Q9NRR1 136 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 KPTNQ9Y664 436 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 C2CD3Q4AC94 2353 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 SIRPB1O00241 398 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 IFNA2P01563 188 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 ZNF44P15621 663 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 ARHGDIBP52566 201 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 RPL31P62899 125 aaKnown RBP16.13■□□□□ 0.17
LSM4-203ENST00000593829 GLIPR1L1Q6UWM5 242 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 KIR3DL3Q8N743 410 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 CHST4Q8NCG5 386 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 OR4S1Q8NGB4 309 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 OR4D6Q8NGJ1 314 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 SIRPDQ9H106 197 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 C19orf12Q9NSK7 152 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 COA4Q9NYJ1 87 aa16.13■□□□□ 0.17
LSM4-203ENST00000593829 DEGS1O15121 323 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 PSPNO60542 156 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 MMP9P14780 707 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 SERPINA2P20848 420 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 LMO1P25800 156 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 IL13RA2Q14627 380 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 ATXN7L3Q14CW9 347 aaPredicted RBP16.12■□□□□ 0.17
LSM4-203ENST00000593829 SLC22A6Q4U2R8 563 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 Q6P435 159 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 HOGA1Q86XE5 327 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 FAM185AQ8N0U4 392 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 OSR2Q8N2R0 312 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 ZFP57Q9NU63 452 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 MXRA5Q9NR99 2828 aa16.12■□□□□ 0.17
LSM4-203ENST00000593829 IFNA4P05014 189 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 PGAM2P15259 253 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 PJVKQ0ZLH3 352 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 KLF17Q5JT82 389 aaPredicted RBP16.11■□□□□ 0.17
LSM4-203ENST00000593829 SAT2Q96F10 170 aaPredicted RBP16.11■□□□□ 0.17
LSM4-203ENST00000593829 RNF126Q9BV68 326 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 ST3GAL6Q9Y274 331 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 NAV3Q8IVL0 2385 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 F8W036 122 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 EPHA1P21709 976 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 BLOC1S1P78537 153 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 PDCD1Q15116 288 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 PIGYQ3MUY2 71 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 ACTBL2Q562R1 376 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 NKAPLQ5M9Q1 402 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 OR10K2Q6IF99 312 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 TBX15Q96SF7 602 aa16.11■□□□□ 0.17
LSM4-203ENST00000593829 ZMAT3Q9HA38 289 aaKnown RBP16.11■□□□□ 0.17
LSM4-203ENST00000593829 A0A1W2PPH5 198 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 MGST3O14880 152 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 OR3A1P47881 315 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 EDDM3BP56851 147 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 RBM11P57052 281 aaKnown RBP16.1■□□□□ 0.17
LSM4-203ENST00000593829 VAX1Q5SQQ9 334 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 C1orf122Q6ZSJ8 110 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 RAB18Q9NP72 206 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 GHRLQ9UBU3 117 aa16.1■□□□□ 0.17
LSM4-203ENST00000593829 PCP4L1A6NKN8 68 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 FAM25EA8MYX2 175 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 M0R1W7 72 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 SLC33A1O00400 549 aaPredicted RBP16.09■□□□□ 0.17
LSM4-203ENST00000593829 CSN2P05814 226 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 PAX6P26367 422 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 UNC119Q13432 240 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms