RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NUDT19A8MXV4 375 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 PDCD5O14737 125 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 MRPS14O60783 128 aaKnown RBP10.9□□□□□ -0.66
APOC1-208ENST00000592535 SCTP09683 121 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 MYL9P24844 172 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 PNLIPRP3Q17RR3 467 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 KCTD21Q4G0X4 260 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 RPL39P5Q59GN2 51 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 TEX38Q6PEX7 206 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 LCNL1Q6ZST4 164 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 REC114Q7Z4M0 266 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 MRPL41Q8IXM3 137 aaKnown RBP10.9□□□□□ -0.66
APOC1-208ENST00000592535 KLHL30-AS1Q8NEE0 82 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 OR56B1Q8NGI3 324 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 ABHD14BQ96IU4 210 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 AURKAIP1Q9NWT8 199 aaPredicted RBP10.9□□□□□ -0.66
APOC1-208ENST00000592535 PIPOXQ9P0Z9 390 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 ZNF107Q9UII5 783 aaPredicted RBP10.9□□□□□ -0.66
APOC1-208ENST00000592535 RAB22AQ9UL26 194 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 RAB29O14966 203 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 RPLP1P05386 114 aaKnown RBP10.89□□□□□ -0.67
APOC1-208ENST00000592535 CEACAM6P40199 344 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 THBS3P49746 956 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 CFHR3Q02985 330 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 MOGAT2Q3SYC2 334 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 UBE2UQ5VVX9 321 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 C22orf42Q6IC83 251 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 FAM71F2Q6NXP2 309 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 FAM131AQ6UXB0 335 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 SPARTQ8N0X7 666 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 RCC1LQ96I51 464 aaKnown RBP10.89□□□□□ -0.67
APOC1-208ENST00000592535 GON7Q9BXV9 100 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 C11orf54Q9H0W9 315 aaPredicted RBP10.89□□□□□ -0.67
APOC1-208ENST00000592535 MGAT4AQ9UM21 535 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 KCNK7Q9Y2U2 307 aa10.89□□□□□ -0.67
APOC1-208ENST00000592535 A0A0B4J203 849 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 IGKV1-6A0A0C4DH72 117 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 IFITM5A6NNB3 132 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 ITGB1BP1O14713 200 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 NBR2O15453 112 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 HSPA12AO43301 675 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 TNFAIP8O95379 198 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 IGF1P05019 195 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 RAB3BP20337 219 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 VDAC1P21796 283 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 ZBTB25P24278 435 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 PSMB9P28065 219 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 MYCNOSP40205 109 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 RANBP1P43487 201 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 FOXE3Q13461 319 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 CXorf66Q5JRM2 361 aaPredicted RBP10.88□□□□□ -0.67
APOC1-208ENST00000592535 GLDNQ6ZMI3 551 aaPredicted RBP10.88□□□□□ -0.67
APOC1-208ENST00000592535 NR2C2APQ86WQ0 139 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 ZNF695Q8IW36 515 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 MRAPQ8TCY5 172 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 DUX3Q96PT4 197 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 AGMATQ9BSE5 352 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 ZNF580Q9UK33 172 aa10.88□□□□□ -0.67
APOC1-208ENST00000592535 SMIM30A4D0T7 59 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 TRDCB7Z8K6 153 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 NDUFA3O95167 84 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 HLA-DRB1P01911 266 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 ELANEP08246 267 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 CD3GP09693 182 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 GALP22466 123 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 SLC6A1P30531 599 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 C5orf64Q2M2E5 130 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 RNF152Q8N8N0 203 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 NPBQ8NG41 125 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 OR10R2Q8NGX6 335 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 EDARADDQ8WWZ3 215 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 KCTD7Q96MP8 289 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 P2RX4Q99571 388 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 RNF150Q9ULK6 438 aa10.87□□□□□ -0.67
APOC1-208ENST00000592535 A0A075B6Q4 140 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 IGHV7-81A0A0B4J1V7 117 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 OR5H14A6NHG9 310 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 G3V318 75 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 H0YJW9 148 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 RAB27BO00194 218 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 MFNGO00587 321 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 ATP6V0E1O15342 81 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 PROP1O75360 226 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 DUS4LO95620 317 aaKnown RBP10.86□□□□□ -0.67
APOC1-208ENST00000592535 IGHG4P01861 327 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 FCGR3AP08637 254 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 SMIM18P0DKX4 95 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 GNB3P16520 340 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 RAB6AP20340 208 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 MRPS15P82914 257 aaKnown RBP10.86□□□□□ -0.67
APOC1-208ENST00000592535 DEFB136Q30KP8 78 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 PTX4Q96A99 478 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 RAX2Q96IS3 184 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 OR51J1Q9H342 316 aa10.86□□□□□ -0.67
APOC1-208ENST00000592535 GHITMQ9H3K2 345 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms