RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 RBKSQ9H477 322 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 FRYLO94915 3013 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 ATXN7O15265 892 aaPredicted RBP9.77□□□□□ -0.85
ZNF540-210ENST00000592533 PPP1CBP62140 327 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 CYP2G1PQ6ZSU1 146 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 ABHD5Q8WTS1 349 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 PYGO2Q9BRQ0 406 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 CDH20Q9HBT6 801 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 DMDP11532 3685 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 TRAV39A0A0B4J263 110 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 ZNF729A6NN14 1252 aaPredicted RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 TMEM250H0YL14 139 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 WDR1O75083 606 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 MRPL49Q13405 166 aaKnown RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SLC10A1Q14973 349 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SPANXN5Q5MJ07 72 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SPATA46Q5T0L3 261 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 MYPOPQ86VE0 399 aaPredicted RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 NAT8Q9UHE5 227 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 TRAV20A0A0B4J274 112 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 PMS2P5A8MQ11 134 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 GATCO43716 136 aaKnown RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 WISP2O76076 250 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 PTBP3O95758 552 aaKnown RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SELEP16581 610 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 FGF8P55075 233 aaPredicted RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 NKX6-1P78426 367 aaPredicted RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SLC35E4Q6ICL7 350 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 LINC00696Q6ZRV3 163 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 RPP25LQ8N5L8 163 aaKnown RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 OR51B6Q9H340 312 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SMOC1Q9H4F8 434 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 C12orf49Q9H741 205 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 VPS13AQ96RL7 3174 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 PPP1R2P9O14990 202 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 ZNF737O75373 536 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 NXPH2O95156 264 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 HAND1O96004 215 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 IGKV1D-33P01593 117 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 IGKV1-33P01594 117 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 MBP02144 154 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SOD3P08294 240 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 SPINK2P20155 84 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 MDKP21741 143 aaPredicted RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 MEF2BQ02080 365 aaPredicted RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 FRZBQ92765 325 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 C5orf30Q96GV9 206 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 TMEM147Q9BVK8 224 aa9.76□□□□□ -0.85
ZNF540-210ENST00000592533 RBM7Q9Y580 266 aaKnown RBP9.76□□□□□ -0.85
ZNF540-210ENST00000592533 UBE2L5PA0A1B0GUS4 154 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 LRRC30A6NM36 301 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 ZNF891A8MT65 544 aaPredicted RBP9.75□□□□□ -0.85
ZNF540-210ENST00000592533 CEBPZOSA8MTT3 80 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 KBTBD11O94819 623 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 TRGC1P0CF51 173 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 IGFBP7Q16270 282 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 FIP1L1Q6UN15 594 aaKnown RBP9.75□□□□□ -0.85
ZNF540-210ENST00000592533 PRR18Q8N4B5 295 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 PRR7Q8TB68 274 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 GMPPAQ96IJ6 420 aaPredicted RBP9.75□□□□□ -0.85
ZNF540-210ENST00000592533 OR2J1Q9GZK6 312 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 KCNIP1Q9NZI2 227 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 CTXND1A0A1B0GTU2 59 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 CDIPTO14735 213 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 ZNF16P17020 682 aaPredicted RBP9.75□□□□□ -0.85
ZNF540-210ENST00000592533 MPLP40238 635 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 OR2B11Q5JQS5 317 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 TMEM164Q5U3C3 297 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 GALMQ96C23 342 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 ZDHHC11Q9H8X9 412 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 SPRR3Q9UBC9 169 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 USF3Q68DE3 2245 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 FREM2Q5SZK8 3169 aa9.75□□□□□ -0.85
ZNF540-210ENST00000592533 OOEPA6NGQ2 149 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 CELA3BP08861 270 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 PAX5Q02548 391 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 ACSM6Q6P461 480 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 LHX4Q969G2 390 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 MANBALQ9NQG1 85 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.74□□□□□ -0.85
ZNF540-210ENST00000592533 SLC39A9Q9NUM3 307 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 TECTAO75443 2155 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 C12orf77C9JDV5 145 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 PSPNO60542 156 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 RAMP3O60896 148 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 CLDN1O95832 211 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
ZNF540-210ENST00000592533 BRWD1-AS2P59051 145 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 CATR1Q13166 79 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.74□□□□□ -0.85
ZNF540-210ENST00000592533 TGIF2LYQ8IUE0 185 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 OR1L1Q8NH94 360 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 FER1L6-AS2Q96M78 137 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 GTF3C1Q12789 2109 aa9.74□□□□□ -0.85
ZNF540-210ENST00000592533 ODAMA1E959 279 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 OR5H1A6NKK0 313 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 RAB29O14966 203 aa9.73□□□□□ -0.85
ZNF540-210ENST00000592533 CLDN14O95500 239 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms