RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 AKIP1Q9NQ31 210 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 TAS2R3Q9NYW6 316 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 COPZ2Q9P299 210 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 ING4Q9UNL4 249 aa7.53□□□□□ -1.2
BRCA1-226ENST00000591534 IGKV1-9A0A0C4DH69 117 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 MEX3AA1L020 520 aaKnown RBP7.52□□□□□ -1.21
BRCA1-226ENST00000591534 GABARAPH6UMI1 98 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 K7EIL1 84 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 CTDSP2O14595 271 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 GSTZ1O43708 216 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-226ENST00000591534 HPGDSO60760 199 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
BRCA1-226ENST00000591534 PRSS3P35030 304 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 RCVRNP35243 200 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 IL13RA2Q14627 380 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 TMEM95Q3KNT9 176 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 SLC22A6Q4U2R8 563 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 ABCA11PQ4W5N1 156 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 ACTBL2Q562R1 376 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 CNIH2Q6PI25 160 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 HEPN1Q6WQI6 88 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 LAX1Q8IWV1 398 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 OSR2Q8N2R0 312 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 Q8N402 240 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 Q8NFD4 153 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 OR4P4Q8NGL7 312 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 CHST6Q9GZX3 395 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 HSF4Q9ULV5 492 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 AMMECR1Q9Y4X0 333 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-226ENST00000591534 NOTCH3Q9UM47 2321 aa7.52□□□□□ -1.21
BRCA1-226ENST00000591534 PIGBOS1A0A0B4J2F0 54 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 PSMB11A5LHX3 300 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 TMEM14DPA8MWL7 114 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 UPK1BO75841 260 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 RBBP9O75884 186 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 MGMTP16455 207 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 PRKACAP17612 351 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 ELK1P19419 428 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 CDK2P24941 298 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 TGFBR1P36897 503 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 RPS27AP62979 156 aaKnown RBP7.51□□□□□ -1.21
BRCA1-226ENST00000591534 SLC35B1P78383 322 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 EGFEM1PQ0D2K5 195 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 RGS21Q2M5E4 152 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 C9orf152Q5JTZ5 239 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 LDLRAD2Q5SZI1 272 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 LYPD6Q86Y78 171 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 COMMD1Q8N668 190 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 TPRX1Q8N7U7 411 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 ZNF565Q8N9K5 539 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 OR51T1Q8NGJ9 327 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 CHPT1Q8WUD6 406 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 CORO2AQ92828 525 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 RFT1Q96AA3 541 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 RAB3CQ96E17 227 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 WWC2-AS2Q96NR7 200 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 B9D2Q9BPU9 175 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 TM2D1Q9BX74 207 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 ZFP57Q9NU63 452 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 PLEKHJ1Q9NW61 149 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 OR6C3Q9NZP0 311 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 IL36RNQ9UBH0 155 aa7.51□□□□□ -1.21
BRCA1-226ENST00000591534 TMEM272A0A1B0GTI8 110 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 BUB1B-PAK6H3BSN5 160 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 LDLRAD4O15165 306 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 PTTG1O95997 202 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 NHLRC4P0CG21 123 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-226ENST00000591534 FUT3P21217 361 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 DUSP1P28562 367 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 CD34P28906 385 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 GNG2P59768 71 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 ZP1P60852 638 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 DYRK1AQ13627 763 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 TPTE2P1Q5T6R2 138 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 PRAMEF5Q5TYX0 476 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 TCF23Q7RTU1 214 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 NR2C2APQ86WQ0 139 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 TMEM17Q86X19 198 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 FAM89BQ8N5H3 189 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 OR10R2Q8NGX6 335 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 SMIM4Q8WVI0 70 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 RPEQ96AT9 228 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 SPACA5Q96QH8 159 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 RBFOX1Q9NWB1 397 aaKnown RBP7.5□□□□□ -1.21
BRCA1-226ENST00000591534 MRPS7Q9Y2R9 242 aaKnown RBP7.5□□□□□ -1.21
BRCA1-226ENST00000591534 MOB4Q9Y3A3 225 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 NBEAL2Q6ZNJ1 2754 aa7.5□□□□□ -1.21
BRCA1-226ENST00000591534 ODAMA1E959 279 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 ZNF729A6NN14 1252 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-226ENST00000591534 MCRIP1C9JLW8 97 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 SIRPB1O00241 398 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 RAMP3O60896 148 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 OR2H2O95918 312 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 IGLV1-47P01700 117 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 CSN2P05814 226 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 ZNF44P15621 663 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 BCL3P20749 454 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 SERPINA2P20848 420 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 CD24P25063 80 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms