RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 A0A0A6YYD4 124 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 IGHV3-43A0A0B4J1X8 118 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 IGHV3-72A0A0B4J1Y9 119 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 TRAV1-2A0A0B4J238 106 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 TMEM14DPA8MWL7 114 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 NUDT19A8MXV4 375 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 EREGO14944 169 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 TXNL1O43396 289 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 CA11O75493 328 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 IGHG4P01861 327 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 IGF1P05019 195 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 GLAP06280 429 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 ELANEP08246 267 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 CLEC2LP0C7M8 214 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 NHLRC4P0CG21 123 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-207ENST00000591519 IGHV3-43DP0DP04 118 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 SLC2A2P11168 524 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-207ENST00000591519 IL3RAP26951 378 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 BLVRBP30043 206 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-207ENST00000591519 REG1BP48304 166 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF134P52741 427 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 DGCR2P98153 550 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 CFHR3Q02985 330 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 CD69Q07108 199 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 C2orf76Q3KRA6 126 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 CT45A1Q5HYN5 189 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 FAM53AQ6NSI3 398 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-207ENST00000591519 CDPF1Q6NVV7 123 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 C6orf201Q7Z4U5 140 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 C5orf24Q7Z6I8 188 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 PRR18Q8N4B5 295 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 FAM71E2Q8N5Q1 922 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF439Q8NDP4 499 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 CT45A3Q8NHU0 189 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 SETD6Q8TBK2 473 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 S1PR3Q99500 378 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 SULT4A1Q9BR01 284 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 FAAP24Q9BTP7 215 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 VCX3AQ9NNX9 186 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 RAB9BQ9NP90 201 aa8.15□□□□□ -1.1
VPS4B-207ENST00000591519 TENM3Q9P273 2699 aa8.15□□□□□ -1.11
VPS4B-207ENST00000591519 TMEM272A0A1B0GTI8 110 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 FAM90A10PA6NDY2 464 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 FAM90A7PA6NKC0 464 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 FAM90A23PA8MXZ1 464 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 ZNF736B4DX44 427 aaPredicted RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 C12orf77C9JDV5 145 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 SOCS1O15524 211 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 SPINT2O43291 252 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 RPLP1P05386 114 aaKnown RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 CHATP28329 748 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 ADMP35318 185 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 TGFBR1P36897 503 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 VEGFCP49767 419 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 F2RL1P55085 397 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 LSM3P62310 102 aaKnown RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 QRFPP83859 136 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 CXorf66Q5JRM2 361 aaPredicted RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 ZNF554Q86TJ5 538 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 NR2C2APQ86WQ0 139 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 OR8U1Q8NH10 309 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 RASL11BQ9BPW5 248 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 URM1Q9BTM9 101 aaKnown RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 LPAR5Q9H1C0 372 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 CHMP1AQ9HD42 196 aaPredicted RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 PLEKHJ1Q9NW61 149 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 STEAP1Q9UHE8 339 aa8.14□□□□□ -1.11
VPS4B-207ENST00000591519 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 KMT2CQ8NEZ4 4911 aaKnown RBP8.14□□□□□ -1.11
VPS4B-207ENST00000591519 A0A075B6Q4 140 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 IFITM5A6NNB3 132 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 SLC31A2O15432 143 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 LANCL1O43813 399 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 CD37P11049 281 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 RCC1P18754 421 aaPredicted RBP8.13□□□□□ -1.11
VPS4B-207ENST00000591519 GALP22466 123 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 PSMB8P28062 276 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 FGF9P31371 208 aaPredicted RBP8.13□□□□□ -1.11
VPS4B-207ENST00000591519 SDC2P34741 201 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 PSMD7P51665 324 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 MORN2Q502X0 79 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 LY6G6FQ5SQ64 297 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 C6orf183Q5T699 404 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 TRAT1Q6PIZ9 186 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 OR10V1Q8NGI7 309 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 OR1L1Q8NH94 360 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 MYOZ3Q8TDC0 251 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 KCTD7Q96MP8 289 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 HDHD3Q9BSH5 251 aaPredicted RBP8.13□□□□□ -1.11
VPS4B-207ENST00000591519 CENPOQ9BU64 300 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 TM2D1Q9BX74 207 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 MBNL3Q9NUK0 354 aaKnown RBP8.13□□□□□ -1.11
VPS4B-207ENST00000591519 DAPK2Q9UIK4 370 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 SCOCQ9UIL1 159 aa8.13□□□□□ -1.11
VPS4B-207ENST00000591519 DNAH9Q9NYC9 4486 aa8.12□□□□□ -1.11
VPS4B-207ENST00000591519 AIREO43918 545 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms