RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 CST11Q9H112 138 aa12.2□□□□□ -0.46
DDX39A-216ENST00000591275 RAB9BQ9NP90 201 aa12.2□□□□□ -0.46
DDX39A-216ENST00000591275 STUB1Q9UNE7 303 aa12.2□□□□□ -0.46
DDX39A-216ENST00000591275 SNTNA6NMZ2 147 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 PTGES3LE9PB15 166 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 IFNA6P05013 189 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 GTF2F2P13984 249 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 PPP1CCP36873 323 aaKnown RBP12.19□□□□□ -0.46
DDX39A-216ENST00000591275 GBX2P52951 348 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-216ENST00000591275 CX3CL1P78423 397 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 MUL1Q969V5 352 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 TMEM106AQ96A25 262 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 FBXL15Q9H469 300 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 RETNQ9HD89 108 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 TMEM138Q9NPI0 162 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 MRPS18AQ9NVS2 196 aaKnown RBP12.19□□□□□ -0.46
DDX39A-216ENST00000591275 PAK1IP1Q9NWT1 392 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-216ENST00000591275 ERVK13-1Q9NX77 482 aa12.19□□□□□ -0.46
DDX39A-216ENST00000591275 IRGMA1A4Y4 181 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 FCN1O00602 326 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 NDUFA3O95167 84 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 CD2P06729 351 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-216ENST00000591275 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-216ENST00000591275 TPPP2P59282 170 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 PPP3R1P63098 170 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 UBE2UQ5VVX9 321 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 ZNF660Q6AZW8 331 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-216ENST00000591275 RAB12Q6IQ22 244 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 GPR148Q8TDV2 347 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 GGHQ92820 318 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 FAM103A1Q9BTL3 118 aaKnown RBP12.18□□□□□ -0.46
DDX39A-216ENST00000591275 TMED9Q9BVK6 235 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 AMBNQ9NP70 447 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 RCC2Q9P258 522 aaKnown RBP12.18□□□□□ -0.46
DDX39A-216ENST00000591275 GAB2Q9UQC2 676 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 RPL36Q9Y3U8 105 aaKnown RBP12.18□□□□□ -0.46
DDX39A-216ENST00000591275 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
DDX39A-216ENST00000591275 CDK1P06493 297 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 BDKRB2P30411 391 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 MRPL28Q13084 256 aaKnown RBP12.17□□□□□ -0.46
DDX39A-216ENST00000591275 PLGLAQ15195 96 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 ACTBL2Q562R1 376 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 UNQ5815/PRO19632Q6UWF5 114 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 FAM131AQ6UXB0 335 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 RAB2BQ8WUD1 216 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 FAM110AQ9BQ89 295 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 SPACA1Q9HBV2 294 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 PEX16Q9Y5Y5 336 aa12.17□□□□□ -0.46
DDX39A-216ENST00000591275 PLECQ15149 4684 aaKnown RBP12.16□□□□□ -0.46
DDX39A-216ENST00000591275 ALMS1Q8TCU4 4167 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 SAA2-SAA4A0A096LPE2 208 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 UBE2QL1A1L167 161 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 ZNF780AO75290 641 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-216ENST00000591275 FADS2O95864 444 aaKnown RBP12.16□□□□□ -0.46
DDX39A-216ENST00000591275 SAA2P0DJI9 122 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-216ENST00000591275 TMEM267Q0VDI3 215 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-216ENST00000591275 IRF3Q14653 427 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 TBCEQ15813 527 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-216ENST00000591275 PYHIN1Q6K0P9 492 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 TRAT1Q6PIZ9 186 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 ZNF833PQ6ZTB9 187 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 PPP1R27Q86WC6 154 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 GAPTQ8N292 157 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 TCTEX1D1Q8N7M0 179 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 MRPS24Q96EL2 167 aaKnown RBP12.16□□□□□ -0.46
DDX39A-216ENST00000591275 RHOVQ96L33 236 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 CLCC1Q96S66 551 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
DDX39A-216ENST00000591275 CCDC160A6NGH7 325 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 RRHO14718 337 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 TRGV3P03979 118 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 MAS1P04201 325 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
DDX39A-216ENST00000591275 RAB40BQ12829 278 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 NEDD8Q15843 81 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 CD200R1LQ6Q8B3 271 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 LINC00299Q6ZSB3 139 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 CLVS1Q8IUQ0 354 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-216ENST00000591275 LFNGQ8NES3 379 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 BANF2Q9H503 90 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 KCNIP1Q9NZI2 227 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 JPT1Q9UK76 154 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 RNF150Q9ULK6 438 aa12.15□□□□□ -0.46
DDX39A-216ENST00000591275 ANKRD34BA5PLL1 514 aa12.14□□□□□ -0.47
DDX39A-216ENST00000591275 SMN1Q16637 294 aaKnown RBP12.14□□□□□ -0.47
DDX39A-216ENST00000591275 GLDNQ6ZMI3 551 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-216ENST00000591275 OR52I1Q8NGK6 324 aa12.14□□□□□ -0.47
DDX39A-216ENST00000591275 OR13C5Q8NGS8 318 aa12.14□□□□□ -0.47
DDX39A-216ENST00000591275 CCDC90BQ9GZT6 254 aa12.14□□□□□ -0.47
DDX39A-216ENST00000591275 MBNL3Q9NUK0 354 aaKnown RBP12.14□□□□□ -0.47
DDX39A-216ENST00000591275 ARPC1BO15143 372 aaKnown RBP12.13□□□□□ -0.47
DDX39A-216ENST00000591275 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
DDX39A-216ENST00000591275 NOL3O60936 208 aaKnown RBP12.13□□□□□ -0.47
DDX39A-216ENST00000591275 RGS11O94810 467 aa12.13□□□□□ -0.47
DDX39A-216ENST00000591275 CD40LGP29965 261 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms