RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TGFBR3LH3BV60 316 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 YPEL1O60688 119 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 OR2F2O95006 317 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 CD1BP29016 333 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 GATA4P43694 442 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 GZMMP51124 257 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 GAS1P54826 345 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 RAG2P55895 527 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 DLX6P56179 175 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 FOXF2Q12947 444 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 OR2F1Q13607 317 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 SMN1Q16637 294 aaKnown RBP5.32□□□□□ -1.56
SMAD4-212ENST00000591126 ASPHD2Q6ICH7 369 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 LCN12Q6JVE5 192 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 SPSB3Q6PJ21 355 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 LYPD4Q6UWN0 246 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 NUDCD2Q8WVJ2 157 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 YPEL2Q96QA6 119 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 CLEC2DQ9UHP7 191 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 VSIG4Q9Y279 399 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 PKIGQ9Y2B9 76 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 RBMX2Q9Y388 322 aaKnown RBP5.32□□□□□ -1.56
SMAD4-212ENST00000591126 TOXO94900 526 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 FOXL2P58012 376 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 LYZP61626 148 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 RPL30P62888 115 aaKnown RBP5.32□□□□□ -1.56
SMAD4-212ENST00000591126 OR5I1Q13606 314 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 C6orf201Q7Z4U5 140 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 GIMAP1Q8WWP7 306 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 IFT22Q9H7X7 185 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 FRRS1LQ9P0K9 344 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 CHST2Q9Y4C5 530 aa5.32□□□□□ -1.56
SMAD4-212ENST00000591126 PLXNA4Q9HCM2 1894 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 TEX48A0A1B0GUV7 120 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 DPRXA6NFQ7 191 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 SRRM5B3KS81 715 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 H3BMH7 237 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 M0QYG6 137 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 HYPMO75409 117 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 PAX6P26367 422 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 B3GALT5-AS1P59052 145 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 LOXL1Q08397 574 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-212ENST00000591126 FUT5Q11128 374 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 OXLD1Q5BKU9 147 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 CADM3Q8N126 398 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 SMCO4Q9NRQ5 59 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 MTFP1Q9UDX5 166 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 AK3Q9UIJ7 227 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 RPH3ALQ9UNE2 315 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF257Q9Y2Q1 563 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 A0A0B4J2A0 478 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 FAM221AA4D161 298 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 FFAR1O14842 300 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 MBPP02686 304 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-212ENST00000591126 FGF7P21781 194 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 MVDP53602 400 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 HSPE1P61604 102 aaKnown RBP5.31□□□□□ -1.56
SMAD4-212ENST00000591126 H3F3AP84243 136 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 OR2T35Q8NGX2 323 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 TMEM18Q96B42 140 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 MAGT1Q9H0U3 335 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 SHPKQ9UHJ6 478 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 FAM223BA6NKX1 122 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 GGCTO75223 188 aaKnown RBP5.31□□□□□ -1.56
SMAD4-212ENST00000591126 KBTBD11O94819 623 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 TCRBP04435 133 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 S100A2P29034 98 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 RAB4BP61018 213 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 PKIAP61925 76 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF154Q13106 437 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 HERPUD1Q15011 391 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 SRSF7Q16629 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMAD4-212ENST00000591126 LINC00303Q3SY05 128 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 KHDC3LQ587J8 217 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 FAM223AQ8IWN6 122 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 TMEM204Q9BSN7 226 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 POFUT1Q9H488 388 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 DCAF16Q9NXF7 216 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 KNL1Q8NG31 2342 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 E7EQL1 145 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 CTAG2O75638 210 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 SFT2D2O95562 160 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 IL7P13232 177 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 UCP3P55916 312 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 ADIPOQQ15848 244 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 DEFB121Q5J5C9 76 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 TMEM78Q5T7P6 136 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 ZNF767PQ75MW2 155 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 BATF2Q8N1L9 274 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 TMEM104Q8NE00 496 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 OR8D4Q8NGM9 314 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 C16orf92Q96LL3 132 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 RBM14Q96PK6 669 aaKnown RBP5.31□□□□□ -1.56
SMAD4-212ENST00000591126 BPESC1Q9GZL8 116 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 RPUSD1Q9UJJ7 312 aaKnown RBP5.31□□□□□ -1.56
SMAD4-212ENST00000591126 MMP24Q9Y5R2 645 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 URGCP-MRPS24S4R325 110 aa5.31□□□□□ -1.56
SMAD4-212ENST00000591126 CACNA1BQ00975 2339 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 IGHV1-69DA0A0B4J2H0 117 aa5.3□□□□□ -1.56
SMAD4-212ENST00000591126 IGHV2-70DA0A0C4DH43 119 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms