RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 S1PR3Q99500 378 aa17.68■□□□□ 0.42
MBD3-208ENST00000590830 ZNF230Q9UIE0 474 aaPredicted RBP17.68■□□□□ 0.42
MBD3-208ENST00000590830 ITGB1BP1O14713 200 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 IGHG2P01859 326 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 ZBTB25P24278 435 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 TGFBR1P36897 503 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 RPL39P5Q59GN2 51 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 NDUFA11Q86Y39 141 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 MAFIPQ8WZ33 124 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 LINC00527Q9UJ94 153 aa17.67■□□□□ 0.42
MBD3-208ENST00000590830 TRIM64CA6NLI5 447 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 PROP1O75360 226 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 GSTT2P0CG29 244 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 GSTT2BP0CG30 244 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 CDNFQ49AH0 187 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 OR5H6Q8NGV6 325 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 LGALS14Q8TCE9 139 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 ABCG5Q9H222 651 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 RNF150Q9ULK6 438 aa17.66■□□□□ 0.42
MBD3-208ENST00000590830 SERPINE3A8MV23 424 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 RAB29O14966 203 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 FABP7O15540 132 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 HSPA12AO43301 675 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 CT45A6P0DMU7 189 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 CT45A5P0DMU8 189 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 CT45A7P0DMV0 189 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 IGSF11Q5DX21 431 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 ZNF329Q86UD4 541 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 FAM71E2Q8N5Q1 922 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 OR4A4PQ8NGN8 299 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 LIN7CQ9NUP9 197 aaKnown RBP17.65■□□□□ 0.42
MBD3-208ENST00000590830 PIPOXQ9P0Z9 390 aa17.65■□□□□ 0.42
MBD3-208ENST00000590830 IGKV1D-8A0A087WSZ0 117 aa17.64■□□□□ 0.41
MBD3-208ENST00000590830 CNTFRP26992 372 aa17.64■□□□□ 0.41
MBD3-208ENST00000590830 GPR12P47775 334 aa17.64■□□□□ 0.41
MBD3-208ENST00000590830 SLC35E3Q7Z769 313 aa17.64■□□□□ 0.41
MBD3-208ENST00000590830 OR8H1Q8NGG4 311 aa17.64■□□□□ 0.41
MBD3-208ENST00000590830 TOLLIPQ9H0E2 274 aa17.64■□□□□ 0.41
MBD3-208ENST00000590830 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.64■□□□□ 0.41
MBD3-208ENST00000590830 RDH8Q9NYR8 311 aa17.64■□□□□ 0.41
MBD3-208ENST00000590830 A0A1W2PRX2 142 aa17.63■□□□□ 0.41
MBD3-208ENST00000590830 MRPS15P82914 257 aaKnown RBP17.63■□□□□ 0.41
MBD3-208ENST00000590830 IDNKQ5T6J7 187 aa17.63■□□□□ 0.41
MBD3-208ENST00000590830 FAM71F2Q6NXP2 309 aa17.63■□□□□ 0.41
MBD3-208ENST00000590830 GLDNQ6ZMI3 551 aaPredicted RBP17.63■□□□□ 0.41
MBD3-208ENST00000590830 HSPB9Q9BQS6 159 aa17.63■□□□□ 0.41
MBD3-208ENST00000590830 CABLES2Q9BTV7 478 aa17.63■□□□□ 0.41
MBD3-208ENST00000590830 TCRBV4S1A1TA0A5B7 111 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 PSMB11A5LHX3 300 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 OPN1MWP04001 364 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 OPN1MW2P0DN77 364 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 OPN1MW3P0DN78 364 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 LINC00205P59089 165 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 ACTBP60709 375 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 ARFRP1Q13795 201 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 ZNF260Q3ZCT1 412 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 EDARADDQ8WWZ3 215 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 SLC25A38Q96DW6 304 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 RASL11BQ9BPW5 248 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 RHBDL2Q9NX52 303 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 NOTCH1P46531 2555 aa17.62■□□□□ 0.41
MBD3-208ENST00000590830 TRBV6-7A0A0A0MS04 114 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 BET1O15155 118 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 AIREO43918 545 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 TALDO1P37837 337 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 RPS19P39019 145 aaKnown RBP17.61■□□□□ 0.41
MBD3-208ENST00000590830 LSM3P62310 102 aaKnown RBP17.61■□□□□ 0.41
MBD3-208ENST00000590830 KIR2DS1Q14954 304 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 SRSF7Q16629 238 aaKnown RBP eCLIP17.61■□□□□ 0.41
MBD3-208ENST00000590830 HACD4Q5VWC8 232 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 FAM131AQ6UXB0 335 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 Q6ZS49 121 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 R3HDM4Q96D70 268 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 GHITMQ9H3K2 345 aa17.61■□□□□ 0.41
MBD3-208ENST00000590830 H0YJW9 148 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 SERPINB10P48595 397 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 MMDQ15546 238 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 TIMM50Q3ZCQ8 353 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 STPG2Q8N412 459 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 DRAXINQ8NBI3 349 aaPredicted RBP17.6■□□□□ 0.41
MBD3-208ENST00000590830 OR4X2Q8NGF9 303 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 OR5AN1Q8NGI8 311 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 CHPT1Q8WUD6 406 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 VCX3AQ9NNX9 186 aa17.6■□□□□ 0.41
MBD3-208ENST00000590830 TSSC4Q9Y5U2 329 aaPredicted RBP17.6■□□□□ 0.41
MBD3-208ENST00000590830 TMEM235A6NFC5 223 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 KCNAB3O43448 404 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 SSX5O60225 188 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 GSTP1P09211 210 aaKnown RBP17.59■□□□□ 0.41
MBD3-208ENST00000590830 DTYMKP23919 212 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 SCAND1P57086 179 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 ARL6IP1Q15041 203 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 NPBQ8NG41 125 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 NUDCD2Q8WVJ2 157 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 PHF21AQ96BD5 680 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 ST6GALNAC5Q9BVH7 336 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 ETV7Q9Y603 341 aa17.59■□□□□ 0.41
MBD3-208ENST00000590830 OR8U9P0C7N5 309 aa17.58■□□□□ 0.4
MBD3-208ENST00000590830 SMIM18P0DKX4 95 aa17.58■□□□□ 0.4
MBD3-208ENST00000590830 SOX6P35712 828 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms