RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TXNL1O43396 289 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 LANCL1O43813 399 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 CD28P10747 220 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 TMEM11P17152 192 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 CD1BP29016 333 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 MOGAT2Q3SYC2 334 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 MOB3BQ86TA1 216 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 C5orf56Q8N8D9 126 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 OR56B1Q8NGI3 324 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 GALMQ96C23 342 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 EAF1Q96JC9 268 aaPredicted RBP8.89□□□□□ -0.99
SMAD4-211ENST00000590499 ABHD14AQ9BUJ0 271 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 IFI27L2Q9H2X8 130 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 C12orf4Q9NQ89 552 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 KCNK7Q9Y2U2 307 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 PLXNB1O43157 2135 aa8.89□□□□□ -0.99
SMAD4-211ENST00000590499 SMIM30A4D0T7 59 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 NOTOA8MTQ0 251 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 ZNF736B4DX44 427 aaPredicted RBP8.88□□□□□ -0.99
SMAD4-211ENST00000590499 RAB27BO00194 218 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 MFNGO00587 321 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 LPLP06858 475 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 HLA-DRB3P79483 266 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 HES1Q14469 280 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 HNF4GQ14541 408 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 TGIF2LXQ8IUE1 241 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 LYG1Q8N1E2 194 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 PTX4Q96A99 478 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 PARP12Q9H0J9 701 aaKnown RBP8.88□□□□□ -0.99
SMAD4-211ENST00000590499 OR51E2Q9H255 320 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 CHMP1AQ9HD42 196 aaPredicted RBP8.88□□□□□ -0.99
SMAD4-211ENST00000590499 Q9N2K0 584 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 PLSCR3Q9NRY6 295 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 ABRACLQ9P1F3 81 aa8.88□□□□□ -0.99
SMAD4-211ENST00000590499 IGKV1-6A0A0C4DH72 117 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 ITGB1BP1O14713 200 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 RGS11O94810 467 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 CSF1P09603 554 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 SLC2A2P11168 524 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-211ENST00000590499 GADD45AP24522 165 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 LSAMPQ13449 338 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 NEDD8Q15843 81 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 TCTEX1D4Q5JR98 221 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 ZNF833PQ6ZTB9 187 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 TPRA1Q86W33 373 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 Q8N9W7 124 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 OR10R2Q8NGX6 335 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 OR2T10Q8NGZ9 312 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 SETD6Q8TBK2 473 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 IL1F10Q8WWZ1 152 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 RAB3CQ96E17 227 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 RBMXL1Q96E39 390 aaKnown RBP8.87□□□□□ -0.99
SMAD4-211ENST00000590499 CITED2Q99967 270 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-211ENST00000590499 CMSS1Q9BQ75 279 aaKnown RBP8.87□□□□□ -0.99
SMAD4-211ENST00000590499 ZNF251Q9BRH9 671 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 MGAT4AQ9UM21 535 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 SSR3Q9UNL2 185 aa8.87□□□□□ -0.99
SMAD4-211ENST00000590499 SAA2-SAA4A0A096LPE2 208 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 MOSP00540 346 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 SCTP09683 121 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 SAA2P0DJI9 122 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-211ENST00000590499 HIST1H1DP16402 221 aaKnown RBP8.86□□□□□ -0.99
SMAD4-211ENST00000590499 CD36P16671 472 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 OR3A3P47888 321 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 CD83Q01151 205 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 FAM71F2Q6NXP2 309 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 NDUFA11Q86Y39 141 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 OR2AK2Q8NG84 335 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 OR5AU1Q8NGC0 362 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 KCTD7Q96MP8 289 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 NABP2Q9BQ15 211 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 CHCHD6Q9BRQ6 235 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 AGMATQ9BSE5 352 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 MRPL20Q9BYC9 149 aaKnown RBP8.86□□□□□ -0.99
SMAD4-211ENST00000590499 RNF167Q9H6Y7 350 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 OR1A1Q9P1Q5 309 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 SLC23A1Q9UHI7 598 aa8.86□□□□□ -0.99
SMAD4-211ENST00000590499 TRIM64CA6NLI5 447 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 RGS13O14921 159 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 PEX14O75381 377 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 IGHG2P01859 326 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 FCGR3AP08637 254 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 CLEC2LP0C7M8 214 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 GNB3P16520 340 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 SDC2P34741 201 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 C9orf152Q5JTZ5 239 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 SFXN4Q6P4A7 337 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 FAM71E2Q8N5Q1 922 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 OR8H1Q8NGG4 311 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 FAM110DQ8TAY7 271 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-211ENST00000590499 CENPOQ9BU64 300 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 TOLLIPQ9H0E2 274 aa8.85□□□□□ -0.99
SMAD4-211ENST00000590499 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMAD4-211ENST00000590499 LIN7CQ9NUP9 197 aaKnown RBP8.85□□□□□ -0.99
SMAD4-211ENST00000590499 LOC100506127A0A0U1RQW1 187 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 METTL21EPA6NDL7 271 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 SERPINE3A8MV23 424 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 TRDCB7Z8K6 153 aa8.84□□□□□ -0.99
SMAD4-211ENST00000590499 RAB29O14966 203 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms