RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SLC26A10Q8NG04 563 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 OR5AP2Q8NGF4 316 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 TSEN15Q8WW01 171 aaKnown RBP6.26□□□□□ -1.41
SMAD4-209ENST00000589941 ABHD6Q9BV23 337 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 NMES1Q9C002 83 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CST11Q9H112 138 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 KCNK15Q9H427 330 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CYTL1Q9NRR1 136 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 SERINC1Q9NRX5 453 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 DECR2Q9NUI1 292 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 TAS2R4Q9NYW5 299 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 ZNF230Q9UIE0 474 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-209ENST00000589941 SLC22A13Q9Y226 551 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 HDGFL3Q9Y3E1 203 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 LRP12Q9Y561 859 aa6.26□□□□□ -1.41
SMAD4-209ENST00000589941 CENPVL3A0A0U1RRI6 287 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 LOC107986453A0A1B0GWG9 222 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 A6NIZ1 184 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 TMEM14DPA8MWL7 114 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 H7C1C5 153 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 PLPP3O14495 311 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 SPRY3O43610 288 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 APOC3P02656 99 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 CCL2P13500 99 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 FOLR2P14207 255 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 CTLA4P16410 223 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 ADCYAP1P18509 176 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 BDKRB2P30411 391 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 LUMP51884 338 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-209ENST00000589941 POLR2HP52434 150 aaKnown RBP6.25□□□□□ -1.41
SMAD4-209ENST00000589941 ATP1B3P54709 279 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 FAM3BP58499 235 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-209ENST00000589941 RAP1BP61224 184 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 LCN6P62502 163 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 RAP1AP62834 184 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 SLC35A1P78382 337 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 CYCSP99999 105 aaKnown RBP6.25□□□□□ -1.41
SMAD4-209ENST00000589941 IL15RAQ13261 267 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 PPP1R1AQ13522 171 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 MOGAT2Q3SYC2 334 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 ACTBL2Q562R1 376 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 RNASE10Q5GAN6 216 aaKnown RBP6.25□□□□□ -1.41
SMAD4-209ENST00000589941 GLYATL3Q5SZD4 288 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 AWAT2Q6E213 333 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 C11orf88Q6PI97 169 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 SVBPQ8N300 66 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 PRSS3P2Q8NHM4 247 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 FGFBP3Q8TAT2 258 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 PPP1R1CQ8WVI7 109 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 RNF133Q8WVZ7 376 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 FAM46BQ96A09 425 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 SAT2Q96F10 170 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-209ENST00000589941 SLC25A44Q96H78 314 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-209ENST00000589941 PHB2Q99623 299 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 PCGF1Q9BSM1 259 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 TAS2R3Q9NYW6 316 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 COMMD9Q9P000 198 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 VPREB3Q9UKI3 123 aa6.25□□□□□ -1.41
SMAD4-209ENST00000589941 METTL21EPA6NDL7 271 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 A8MVM7 634 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 RPL36A-HNRNPH2H7BZ11 118 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 XKRYO14609 159 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 OR2T1O43869 369 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 SSX5O60225 188 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 CA11O75493 328 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 HLA-AP01891 365 aaKnown RBP6.24□□□□□ -1.41
SMAD4-209ENST00000589941 PATE4P0C8F1 98 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 TPT1P13693 172 aaKnown RBP6.24□□□□□ -1.41
SMAD4-209ENST00000589941 PSMB6P28072 239 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 SCRN3Q0VDG4 424 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 UNC119Q13432 240 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 GUCA2BQ16661 112 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 FAM74A1Q5RGS3 127 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 DNM1P34Q6PK57 102 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 BTNL3Q6UXE8 466 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 GRINAQ7Z429 371 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.24□□□□□ -1.41
SMAD4-209ENST00000589941 LHFPL1Q86WI0 220 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 PUSL1Q8N0Z8 303 aaKnown RBP6.24□□□□□ -1.41
SMAD4-209ENST00000589941 ARRDC1Q8N5I2 433 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 C10orf53Q8N6V4 93 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 OR4D6Q8NGJ1 314 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 OR51A2Q8NGJ7 313 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 OR1S2Q8NGQ3 325 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 ARL11Q969Q4 196 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 NARS2Q96I59 477 aaKnown RBP6.24□□□□□ -1.41
SMAD4-209ENST00000589941 SMIM8Q96KF7 97 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 AQP10Q96PS8 301 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 CITED2Q99967 270 aaPredicted RBP6.24□□□□□ -1.41
SMAD4-209ENST00000589941 RNF126Q9BV68 326 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 LINC00470Q9BZP3 86 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 EGLN1Q9GZT9 426 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 RAB18Q9NP72 206 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 FAM206AQ9NX38 181 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 COA4Q9NYJ1 87 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 MBD2Q9UBB5 411 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 OR52A1Q9UKL2 312 aa6.24□□□□□ -1.41
SMAD4-209ENST00000589941 NOP16Q9Y3C1 178 aaKnown RBP6.24□□□□□ -1.41
SMAD4-209ENST00000589941 TMED7-TICAM2A0A0A6YYA0 188 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms