RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 IDNKQ5T6J7 187 aa13.42□□□□□ -0.26
H3F3B-208ENST00000589599 NDUFA11Q86Y39 141 aa13.42□□□□□ -0.26
H3F3B-208ENST00000589599 CROCCP3Q8IVE0 287 aa13.42□□□□□ -0.26
H3F3B-208ENST00000589599 YIPF6Q96EC8 236 aa13.42□□□□□ -0.26
H3F3B-208ENST00000589599 CITED2Q99967 270 aaPredicted RBP13.42□□□□□ -0.26
H3F3B-208ENST00000589599 NABP2Q9BQ15 211 aa13.42□□□□□ -0.26
H3F3B-208ENST00000589599 MRPL20Q9BYC9 149 aaKnown RBP13.42□□□□□ -0.26
H3F3B-208ENST00000589599 ETV7Q9Y603 341 aa13.42□□□□□ -0.26
H3F3B-208ENST00000589599 VWFP04275 2813 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 RRP9O43818 475 aaKnown RBP13.41□□□□□ -0.26
H3F3B-208ENST00000589599 OPN1MWP04001 364 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 OPN1MW2P0DN77 364 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 OPN1MW3P0DN78 364 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 SRSF7Q16629 238 aaKnown RBP eCLIP13.41□□□□□ -0.264e-8■■□□□ 12.4
H3F3B-208ENST00000589599 HIST2H2BDQ6DRA6 164 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 SLC35E3Q7Z769 313 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 FOXRED2Q8IWF2 684 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 OR4X2Q8NGF9 303 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 OR10J5Q8NHC4 309 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.41□□□□□ -0.26
H3F3B-208ENST00000589599 PLSCR3Q9NRY6 295 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 LIN7CQ9NUP9 197 aaKnown RBP13.41□□□□□ -0.26
H3F3B-208ENST00000589599 RHBDL2Q9NX52 303 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 ZNF221Q9UK13 617 aa13.41□□□□□ -0.26
H3F3B-208ENST00000589599 IGKV1-6A0A0C4DH72 117 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 TCRBV4S1A1TA0A5B7 111 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 PSMB11A5LHX3 300 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 BET1O15155 118 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 DIRAS3O95661 229 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 IGHG2P01859 326 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 GSTP1P09211 210 aaKnown RBP13.4□□□□□ -0.26
H3F3B-208ENST00000589599 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 PITPNAQ00169 270 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 HACD4Q5VWC8 232 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 Q8N9W7 124 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 CHPT1Q8WUD6 406 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 ABHD14BQ96IU4 210 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 PARP12Q9H0J9 701 aaKnown RBP13.4□□□□□ -0.26
H3F3B-208ENST00000589599 ABCG5Q9H222 651 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 RDH8Q9NYR8 311 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 ZNF230Q9UIE0 474 aaPredicted RBP13.4□□□□□ -0.26
H3F3B-208ENST00000589599 RNF150Q9ULK6 438 aa13.4□□□□□ -0.26
H3F3B-208ENST00000589599 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 KCNAB3O43448 404 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 DTYMKP23919 212 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 MC5RP33032 325 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 GPR12P47775 334 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 F2RL1P55085 397 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 SLC35B1P78383 322 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 CD83Q01151 205 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 RPL39P5Q59GN2 51 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 Q6ZS49 121 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 OR4F17Q8NGA8 305 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 MAFIPQ8WZ33 124 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 OR4F4Q96R69 305 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 ZNF251Q9BRH9 671 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 AGMATQ9BSE5 352 aa13.39□□□□□ -0.27
H3F3B-208ENST00000589599 TRBV6-7A0A0A0MS04 114 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 AP4M1O00189 453 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 SOX6P35712 828 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 GNG2P59768 71 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 ACTBP60709 375 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 LSM3P62310 102 aaKnown RBP13.38□□□□□ -0.27
H3F3B-208ENST00000589599 MMDQ15546 238 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 PNLIPRP3Q17RR3 467 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 IGSF11Q5DX21 431 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 R3HDM4Q96D70 268 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 GINS4Q9BRT9 223 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 CABLES2Q9BTV7 478 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 ST6GALNAC5Q9BVH7 336 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 TOLLIPQ9H0E2 274 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 DCSTAMPQ9H295 470 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 DIABLOQ9NR28 239 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
H3F3B-208ENST00000589599 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
H3F3B-208ENST00000589599 CMYA5Q8N3K9 4069 aa13.38□□□□□ -0.27
H3F3B-208ENST00000589599 A0A0A6YYH2 397 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 OR5H14A6NHG9 310 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 A6NJ64 397 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 H7C2Y5 167 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 CT45A6P0DMU7 189 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 CT45A5P0DMU8 189 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 CT45A7P0DMV0 189 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 COMMD1Q8N668 190 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.37□□□□□ -0.27
H3F3B-208ENST00000589599 OR5H6Q8NGV6 325 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 NOL4LQ96MY1 436 aaPredicted RBP13.37□□□□□ -0.27
H3F3B-208ENST00000589599 KIAA1456Q9P272 454 aa13.37□□□□□ -0.27
H3F3B-208ENST00000589599 ELF5Q9UKW6 265 aaPredicted RBP13.37□□□□□ -0.27
H3F3B-208ENST00000589599 RBM7Q9Y580 266 aaKnown RBP13.37□□□□□ -0.27
H3F3B-208ENST00000589599 TRAV18A0A075B6X5 111 aa13.36□□□□□ -0.27
H3F3B-208ENST00000589599 A0A1W2PRX2 142 aa13.36□□□□□ -0.27
H3F3B-208ENST00000589599 TMEM235A6NFC5 223 aa13.36□□□□□ -0.27
H3F3B-208ENST00000589599 CTXN2P0C2S0 81 aa13.36□□□□□ -0.27
H3F3B-208ENST00000589599 OR8U9P0C7N5 309 aa13.36□□□□□ -0.27
H3F3B-208ENST00000589599 RPS19P39019 145 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms